Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.43□□□□□ -0.1
TFF3Q07654 AL138688.1-201ENST00000624851 1594 ntBASIC14.43□□□□□ -0.1
TFF3Q07654 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TFF3Q07654 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
TFF3Q07654 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TFF3Q07654 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TFF3Q07654 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.42□□□□□ -0.1
TFF3Q07654 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 AC098614.1-201ENST00000368528 745 ntBASIC14.42□□□□□ -0.1
TFF3Q07654 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.42□□□□□ -0.1
TFF3Q07654 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.42□□□□□ -0.1
TFF3Q07654 AL079307.3-201ENST00000556114 283 ntBASIC14.42□□□□□ -0.1
TFF3Q07654 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.42□□□□□ -0.1
TFF3Q07654 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.42□□□□□ -0.1
TFF3Q07654 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.42□□□□□ -0.1
TFF3Q07654 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.42□□□□□ -0.1
TFF3Q07654 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.42□□□□□ -0.1
TFF3Q07654 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.42□□□□□ -0.1
TFF3Q07654 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.42□□□□□ -0.1
TFF3Q07654 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
TFF3Q07654 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TFF3Q07654 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.42□□□□□ -0.1
TFF3Q07654 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TFF3Q07654 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.41□□□□□ -0.1
TFF3Q07654 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TFF3Q07654 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.41□□□□□ -0.1
TFF3Q07654 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TFF3Q07654 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 AC135586.1-201ENST00000539323 574 ntBASIC14.41□□□□□ -0.1
TFF3Q07654 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.41□□□□□ -0.1
TFF3Q07654 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.41□□□□□ -0.1
TFF3Q07654 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
TFF3Q07654 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.41□□□□□ -0.1
TFF3Q07654 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TFF3Q07654 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TFF3Q07654 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TFF3Q07654 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.4□□□□□ -0.1
TFF3Q07654 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.4□□□□□ -0.1
TFF3Q07654 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TFF3Q07654 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.4□□□□□ -0.1
TFF3Q07654 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms