Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 U82695.1-201ENST00000635752 1889 ntBASIC14.38□□□□□ -0.11
HIST1H3AP68431 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 KRT18P34-201ENST00000488218 1270 ntBASIC14.38□□□□□ -0.11
HIST1H3AP68431 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 AP002472.1-201ENST00000577490 586 ntBASIC14.38□□□□□ -0.11
HIST1H3AP68431 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 AC140113.2-201ENST00000604370 208 ntBASIC14.38□□□□□ -0.11
HIST1H3AP68431 AC027601.4-201ENST00000611259 610 ntBASIC14.38□□□□□ -0.11
HIST1H3AP68431 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 PCDHA1-201ENST00000378133 2726 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 RNA5SP416-201ENST00000516838 111 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 AC068137.2-201ENST00000605408 478 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 AC120114.3-201ENST00000611923 658 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 AL513190.1-201ENST00000621254 727 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 AL161645.1-201ENST00000622716 1255 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 AL365203.3-201ENST00000609742 2057 ntBASIC14.37□□□□□ -0.11
HIST1H3AP68431 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H3AP68431 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
HIST1H3AP68431 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 AL603832.2-201ENST00000566195 2125 ntBASIC14.36□□□□□ -0.11
HIST1H3AP68431 AC016027.1-202ENST00000607927 1699 ntBASIC14.36□□□□□ -0.11
HIST1H3AP68431 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms