Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COL8A2P25067 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.9□□□□□ -0.18
COL8A2P25067 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.9□□□□□ -0.18
COL8A2P25067 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
COL8A2P25067 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.9□□□□□ -0.19
COL8A2P25067 FOXO1B-201ENST00000504678 1527 ntBASIC13.9□□□□□ -0.19
COL8A2P25067 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.9□□□□□ -0.19
COL8A2P25067 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 AC055876.3-201ENST00000431496 288 ntBASIC13.89□□□□□ -0.19
COL8A2P25067 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 SPCS2P1-201ENST00000561636 679 ntBASIC13.89□□□□□ -0.19
COL8A2P25067 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 AC092364.2-202ENST00000597012 1073 ntBASIC13.89□□□□□ -0.19
COL8A2P25067 AC138649.4-201ENST00000612222 287 ntBASIC13.89□□□□□ -0.19
COL8A2P25067 SPTSSB-204ENST00000617024 1292 ntBASIC13.89□□□□□ -0.19
COL8A2P25067 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.89□□□□□ -0.19
COL8A2P25067 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL8A2P25067 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.89□□□□□ -0.19
COL8A2P25067 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.89□□□□□ -0.19
COL8A2P25067 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
COL8A2P25067 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
COL8A2P25067 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.88□□□□□ -0.19
COL8A2P25067 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.88□□□□□ -0.19
COL8A2P25067 TREML5P-201ENST00000421694 576 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 AC107890.1-201ENST00000422478 521 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.88□□□□□ -0.19
COL8A2P25067 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 AC125807.1-201ENST00000483097 614 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 AC093214.1-201ENST00000511688 1107 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 RARRES2P9-201ENST00000565168 469 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.88□□□□□ -0.19
COL8A2P25067 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 LINC02084-201ENST00000606069 1096 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 AC003101.2-201ENST00000612557 442 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms