Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.09■□□□□ 0.17
PCNAP12004 HCG4-201ENST00000418983 998 ntBASIC16.09■□□□□ 0.17
PCNAP12004 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 RNA5SP415-201ENST00000517246 115 ntBASIC16.09■□□□□ 0.17
PCNAP12004 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCNAP12004 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.09■□□□□ 0.17
PCNAP12004 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.09■□□□□ 0.17
PCNAP12004 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.09■□□□□ 0.17
PCNAP12004 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.09■□□□□ 0.17
PCNAP12004 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 HLA-A-201ENST00000376802 1334 ntBASIC16.09■□□□□ 0.17
PCNAP12004 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 AC005052.1-201ENST00000625181 2492 ntBASIC16.09■□□□□ 0.17
PCNAP12004 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 KRT8P39-201ENST00000396270 1433 ntBASIC16.09■□□□□ 0.17
PCNAP12004 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.09■□□□□ 0.17
PCNAP12004 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PCNAP12004 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PCNAP12004 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCNAP12004 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.09■□□□□ 0.17
PCNAP12004 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.08■□□□□ 0.17
PCNAP12004 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCNAP12004 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCNAP12004 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCNAP12004 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCNAP12004 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCNAP12004 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.08■□□□□ 0.16
PCNAP12004 CRYGEP-201ENST00000412192 528 ntBASIC16.08■□□□□ 0.16
PCNAP12004 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.08■□□□□ 0.16
PCNAP12004 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.08■□□□□ 0.16
PCNAP12004 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.08■□□□□ 0.16
PCNAP12004 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 AC012569.1-201ENST00000591191 1524 ntBASIC16.08■□□□□ 0.16
PCNAP12004 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCNAP12004 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCNAP12004 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.08■□□□□ 0.16
PCNAP12004 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.08■□□□□ 0.16
PCNAP12004 AL512652.2-201ENST00000625156 1716 ntBASIC16.08■□□□□ 0.16
PCNAP12004 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCNAP12004 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCNAP12004 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCNAP12004 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.07■□□□□ 0.16
PCNAP12004 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 PRSS29P-201ENST00000440800 595 ntBASIC16.07■□□□□ 0.16
PCNAP12004 AC009947.1-201ENST00000444350 727 ntBASIC16.07■□□□□ 0.16
PCNAP12004 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 CXCL1P1-201ENST00000502804 216 ntBASIC16.07■□□□□ 0.16
PCNAP12004 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCNAP12004 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.07■□□□□ 0.16
PCNAP12004 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.07■□□□□ 0.16
PCNAP12004 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.07■□□□□ 0.16
PCNAP12004 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms