Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZBTB45P2-201ENST00000452245 1531 ntBASIC28.19■■■□□ 2.1
TOP2AP11388 GCK-202ENST00000345378 2421 ntTSL 2 BASIC28.19■■■□□ 2.1
TOP2AP11388 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TOP2AP11388 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
TOP2AP11388 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TOP2AP11388 RERG-209ENST00000546331 1383 ntTSL 2 BASIC28.19■■■□□ 2.1
TOP2AP11388 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC28.19■■■□□ 2.1
TOP2AP11388 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TOP2AP11388 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TOP2AP11388 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC28.18■■■□□ 2.1
TOP2AP11388 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 AC092933.1-201ENST00000393644 945 ntBASIC28.18■■■□□ 2.1
TOP2AP11388 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC28.18■■■□□ 2.1
TOP2AP11388 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC28.18■■■□□ 2.1
TOP2AP11388 AC244669.2-201ENST00000612320 853 ntBASIC28.18■■■□□ 2.1
TOP2AP11388 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC28.18■■■□□ 2.1
TOP2AP11388 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC28.18■■■□□ 2.1
TOP2AP11388 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC28.18■■■□□ 2.1
TOP2AP11388 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
TOP2AP11388 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
TOP2AP11388 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC28.18■■■□□ 2.1
TOP2AP11388 PKD1P6-201ENST00000343738 4769 ntBASIC28.18■■■□□ 2.1
TOP2AP11388 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TOP2AP11388 RIT1-205ENST00000539040 919 ntTSL 2 BASIC28.18■■■□□ 2.1
TOP2AP11388 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC28.18■■■□□ 2.1
TOP2AP11388 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC28.18■■■□□ 2.1
TOP2AP11388 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC28.18■■■□□ 2.1
TOP2AP11388 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TOP2AP11388 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC28.17■■■□□ 2.1
TOP2AP11388 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TOP2AP11388 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC28.17■■■□□ 2.1
TOP2AP11388 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
TOP2AP11388 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
TOP2AP11388 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
TOP2AP11388 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC28.17■■■□□ 2.1
TOP2AP11388 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TOP2AP11388 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TOP2AP11388 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
TOP2AP11388 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TOP2AP11388 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC28.17■■■□□ 2.1
TOP2AP11388 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC28.17■■■□□ 2.1
TOP2AP11388 BCRP2-202ENST00000447763 634 ntBASIC28.17■■■□□ 2.1
TOP2AP11388 BCRP6-201ENST00000510112 632 ntBASIC28.17■■■□□ 2.1
TOP2AP11388 BCRP7-201ENST00000511549 544 ntBASIC28.17■■■□□ 2.1
TOP2AP11388 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
TOP2AP11388 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC28.17■■■□□ 2.1
TOP2AP11388 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC28.17■■■□□ 2.1
TOP2AP11388 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC28.17■■■□□ 2.1
TOP2AP11388 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC28.17■■■□□ 2.1
TOP2AP11388 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC28.17■■■□□ 2.1
TOP2AP11388 AC009542.2-202ENST00000619004 1067 ntBASIC28.17■■■□□ 2.1
TOP2AP11388 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TOP2AP11388 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC28.16■■■□□ 2.1
TOP2AP11388 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TOP2AP11388 GZMB-202ENST00000382540 816 ntTSL 5 BASIC28.16■■■□□ 2.1
TOP2AP11388 AL355864.2-201ENST00000447420 863 ntBASIC28.16■■■□□ 2.1
TOP2AP11388 CD74-212ENST00000524315 584 ntTSL 5 BASIC28.16■■■□□ 2.1
TOP2AP11388 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
TOP2AP11388 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TOP2AP11388 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC28.16■■■□□ 2.1
TOP2AP11388 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TOP2AP11388 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TOP2AP11388 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC28.16■■■□□ 2.1
TOP2AP11388 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
TOP2AP11388 AC009053.2-201ENST00000563701 2365 ntBASIC28.16■■■□□ 2.1
TOP2AP11388 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC28.16■■■□□ 2.1
TOP2AP11388 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TOP2AP11388 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TOP2AP11388 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
TOP2AP11388 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TOP2AP11388 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC28.15■■■□□ 2.1
TOP2AP11388 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
TOP2AP11388 MGST3-203ENST00000367885 680 ntTSL 2 BASIC28.15■■■□□ 2.1
TOP2AP11388 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TOP2AP11388 FAM21FP-201ENST00000426241 1131 ntBASIC28.15■■■□□ 2.1
TOP2AP11388 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TOP2AP11388 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC28.15■■■□□ 2.1
TOP2AP11388 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC28.15■■■□□ 2.1
TOP2AP11388 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC28.15■■■□□ 2.1
TOP2AP11388 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC28.15■■■□□ 2.1
TOP2AP11388 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
TOP2AP11388 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC28.14■■■□□ 2.1
TOP2AP11388 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
TOP2AP11388 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC28.14■■■□□ 2.1
TOP2AP11388 AC134915.1-201ENST00000426461 574 ntBASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms