Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.86□□□□□ -0.35
CD28P10747 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 AC008761.3-201ENST00000624803 892 ntBASIC12.86□□□□□ -0.35
CD28P10747 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CD28P10747 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 AC073439.1-201ENST00000624121 1774 ntBASIC12.85□□□□□ -0.35
CD28P10747 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 FOXO1B-201ENST00000504678 1527 ntBASIC12.85□□□□□ -0.35
CD28P10747 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.85□□□□□ -0.35
CD28P10747 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.85□□□□□ -0.35
CD28P10747 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.85□□□□□ -0.35
CD28P10747 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.85□□□□□ -0.35
CD28P10747 SPDYE12P-201ENST00000618416 771 ntBASIC12.85□□□□□ -0.35
CD28P10747 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 AF228730.6-201ENST00000641497 218 ntBASIC12.85□□□□□ -0.35
CD28P10747 AC084121.3-201ENST00000641716 218 ntBASIC12.85□□□□□ -0.35
CD28P10747 AC105233.6-201ENST00000642093 218 ntBASIC12.85□□□□□ -0.35
CD28P10747 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.85□□□□□ -0.35
CD28P10747 PCDHB17P-201ENST00000539533 2393 ntBASIC12.85□□□□□ -0.35
CD28P10747 AC099398.1-201ENST00000567919 2776 ntBASIC12.85□□□□□ -0.35
CD28P10747 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD28P10747 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD28P10747 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD28P10747 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms