Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 AC004870.1-201ENST00000315132 882 ntBASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 PMS2P4-201ENST00000412466 1052 ntBASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 FAAHP1-202ENST00000446499 1238 ntBASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 MIR3909-201ENST00000579518 119 ntBASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 AL691432.3-201ENST00000621860 400 ntBASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 AC024909.3-201ENST00000611513 2257 ntBASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HNRNPCL4P0DMR1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 RNU1-129P-201ENST00000384064 167 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 HMGA1P7-201ENST00000406908 502 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AC079781.3-201ENST00000449110 356 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AC092910.1-201ENST00000482027 1129 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AC108751.1-201ENST00000490852 363 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AL031432.2-201ENST00000566714 459 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AL928711.1-201ENST00000570165 459 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 U1.21-201ENST00000580816 167 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 RN7SL510P-201ENST00000581311 263 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AL773604.1-201ENST00000617417 272 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AC005622.1-201ENST00000636801 1703 ntBASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HNRNPCL4P0DMR1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.3■□□□□ 0.04
HNRNPCL4P0DMR1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms