Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC079316.1-201ENST00000548397 411 ntBASIC16.32■□□□□ 0.2
PDGFBP01127 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.32■□□□□ 0.2
PDGFBP01127 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.32■□□□□ 0.2
PDGFBP01127 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 MIR4722-201ENST00000578292 60 ntBASIC16.32■□□□□ 0.2
PDGFBP01127 MIR4706-201ENST00000582134 82 ntBASIC16.32■□□□□ 0.2
PDGFBP01127 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFBP01127 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFBP01127 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 RHOXF1P1-202ENST00000635473 501 ntBASIC16.32■□□□□ 0.2
PDGFBP01127 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFBP01127 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFBP01127 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 ABALON-201ENST00000629058 1903 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 AL138781.2-201ENST00000617896 1843 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFBP01127 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDGFBP01127 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PDGFBP01127 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 FO393414.2-201ENST00000405153 598 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFBP01127 AC005077.2-201ENST00000449786 690 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFBP01127 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFBP01127 KRT90P-201ENST00000549264 1064 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.31■□□□□ 0.2
PDGFBP01127 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 AC124283.3-201ENST00000570869 594 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 CLUHP6-201ENST00000580789 941 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 AL049840.4-201ENST00000602422 811 ntBASIC16.31■□□□□ 0.2
PDGFBP01127 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFBP01127 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFBP01127 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFBP01127 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFBP01127 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PDGFBP01127 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 CYP4F24P-201ENST00000586049 1580 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFBP01127 AC134312.5-201ENST00000568031 1313 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFBP01127 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 BAATP1-201ENST00000412284 1225 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.3■□□□□ 0.2
PDGFBP01127 AKR7A2P1-201ENST00000460134 915 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.3■□□□□ 0.2
PDGFBP01127 ENPP7P5-201ENST00000541031 1031 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFBP01127 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.3■□□□□ 0.2
PDGFBP01127 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFBP01127 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.3■□□□□ 0.2
PDGFBP01127 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
PDGFBP01127 AC008687.7-202ENST00000637404 953 ntBASIC16.3■□□□□ 0.2
PDGFBP01127 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFBP01127 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFBP01127 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDGFBP01127 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms