Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.87■■□□□ 1.25
MSH5O43196 RN7SKP182-201ENST00000410772 298 ntBASIC22.87■■□□□ 1.25
MSH5O43196 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.87■■□□□ 1.25
MSH5O43196 TPTE2P1-204ENST00000435256 593 ntBASIC22.87■■□□□ 1.25
MSH5O43196 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
MSH5O43196 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC22.87■■□□□ 1.25
MSH5O43196 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC22.87■■□□□ 1.25
MSH5O43196 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
MSH5O43196 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.87■■□□□ 1.25
MSH5O43196 TPTE2P5-203ENST00000458118 728 ntBASIC22.87■■□□□ 1.25
MSH5O43196 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.87■■□□□ 1.25
MSH5O43196 AC233266.2-201ENST00000567067 528 ntBASIC22.87■■□□□ 1.25
MSH5O43196 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.87■■□□□ 1.25
MSH5O43196 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.87■■□□□ 1.25
MSH5O43196 AL022161.1-201ENST00000604390 213 ntBASIC22.87■■□□□ 1.25
MSH5O43196 AL078644.1-201ENST00000609881 752 ntBASIC22.87■■□□□ 1.25
MSH5O43196 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC22.87■■□□□ 1.25
MSH5O43196 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.87■■□□□ 1.25
MSH5O43196 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.87■■□□□ 1.25
MSH5O43196 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC22.86■■□□□ 1.25
MSH5O43196 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 GEMIN2-202ENST00000308317 1420 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC22.86■■□□□ 1.25
MSH5O43196 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 TMX3-202ENST00000443099 913 ntTSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 OR6K5P-201ENST00000447050 945 ntBASIC22.86■■□□□ 1.25
MSH5O43196 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC22.86■■□□□ 1.25
MSH5O43196 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC22.86■■□□□ 1.25
MSH5O43196 KRT18P41-201ENST00000518924 1277 ntBASIC22.86■■□□□ 1.25
MSH5O43196 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.86■■□□□ 1.25
MSH5O43196 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 AC245884.10-201ENST00000597355 337 ntBASIC22.86■■□□□ 1.25
MSH5O43196 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 PGM5P2-202ENST00000637225 1043 ntBASIC22.86■■□□□ 1.25
MSH5O43196 AC106858.1-201ENST00000637497 429 ntBASIC22.86■■□□□ 1.25
MSH5O43196 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
MSH5O43196 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.86■■□□□ 1.25
MSH5O43196 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 AC138932.1-201ENST00000534164 6830 ntBASIC22.86■■□□□ 1.25
MSH5O43196 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSH5O43196 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 AC004817.3-201ENST00000602957 2129 ntBASIC22.85■■□□□ 1.25
MSH5O43196 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 HYMAI-201ENST00000635591 3347 ntBASIC22.85■■□□□ 1.25
MSH5O43196 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.85■■□□□ 1.25
MSH5O43196 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms