Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SPDYE11-202ENST00000450699 704 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 ALG1L5P-201ENST00000482043 771 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SPDYE9P-201ENST00000570642 692 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC073389.1-201ENST00000595595 795 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SPDYE10P-202ENST00000612005 668 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SPDYE8P-202ENST00000612377 668 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC008267.7-201ENST00000624570 1194 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 GPX1P2-201ENST00000429271 606 ntBASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 YBX1P5-201ENST00000509441 847 ntBASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC105233.2-201ENST00000523697 349 ntBASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AF228730.5-201ENST00000530288 346 ntBASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC196A0A1B0GTZ2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 UPF3AP3-201ENST00000420996 769 ntBASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 CEND1P1-201ENST00000451006 455 ntBASIC19.1■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC243562.1-201ENST00000560672 389 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms