Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHC3Q92529 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SHC3Q92529 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHC3Q92529 SPCS2P3-201ENST00000500401 656 ntBASIC25.43■■□□□ 1.66
SHC3Q92529 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHC3Q92529 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SHC3Q92529 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.42■■□□□ 1.66
SHC3Q92529 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SHC3Q92529 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.42■■□□□ 1.66
SHC3Q92529 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
SHC3Q92529 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SHC3Q92529 U85056.1-201ENST00000616429 682 ntBASIC25.42■■□□□ 1.66
SHC3Q92529 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
SHC3Q92529 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SHC3Q92529 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SHC3Q92529 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.41■■□□□ 1.66
SHC3Q92529 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SHC3Q92529 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHC3Q92529 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.41■■□□□ 1.66
SHC3Q92529 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHC3Q92529 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHC3Q92529 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SHC3Q92529 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHC3Q92529 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHC3Q92529 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.4■■□□□ 1.66
SHC3Q92529 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC3Q92529 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHC3Q92529 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHC3Q92529 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHC3Q92529 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHC3Q92529 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
SHC3Q92529 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
SHC3Q92529 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHC3Q92529 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.39■■□□□ 1.66
SHC3Q92529 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SHC3Q92529 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
SHC3Q92529 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
SHC3Q92529 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC3Q92529 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.38■■□□□ 1.65
SHC3Q92529 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SHC3Q92529 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHC3Q92529 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC3Q92529 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC3Q92529 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC3Q92529 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC3Q92529 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC3Q92529 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC3Q92529 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SHC3Q92529 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC3Q92529 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
SHC3Q92529 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.36■■□□□ 1.65
SHC3Q92529 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC3Q92529 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.35■■□□□ 1.65
SHC3Q92529 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHC3Q92529 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHC3Q92529 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHC3Q92529 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHC3Q92529 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHC3Q92529 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHC3Q92529 DUX4L9-201ENST00000449051 1259 ntBASIC25.34■■□□□ 1.65
SHC3Q92529 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SHC3Q92529 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.34■■□□□ 1.65
SHC3Q92529 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHC3Q92529 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
SHC3Q92529 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHC3Q92529 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.33■■□□□ 1.65
SHC3Q92529 KRT18P60-201ENST00000312876 1297 ntBASIC25.33■■□□□ 1.65
SHC3Q92529 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.33■■□□□ 1.65
SHC3Q92529 ABHD17AP5-201ENST00000580133 923 ntBASIC25.33■■□□□ 1.65
SHC3Q92529 AC018755.3-202ENST00000596210 929 ntBASIC25.33■■□□□ 1.65
SHC3Q92529 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.33■■□□□ 1.65
SHC3Q92529 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SHC3Q92529 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SHC3Q92529 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SHC3Q92529 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHC3Q92529 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.32■■□□□ 1.64
SHC3Q92529 RPS2P7-201ENST00000447334 885 ntBASIC25.32■■□□□ 1.64
SHC3Q92529 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHC3Q92529 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.32■■□□□ 1.64
SHC3Q92529 AP003733.4-201ENST00000623785 1697 ntBASIC25.32■■□□□ 1.64
SHC3Q92529 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHC3Q92529 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SHC3Q92529 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SHC3Q92529 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SHC3Q92529 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SHC3Q92529 AC129492.7-201ENST00000622992 756 ntBASIC25.31■■□□□ 1.64
SHC3Q92529 AL139125.2-201ENST00000623134 1869 ntBASIC25.31■■□□□ 1.64
SHC3Q92529 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SHC3Q92529 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC3Q92529 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SHC3Q92529 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.3■■□□□ 1.64
SHC3Q92529 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.3■■□□□ 1.64
SHC3Q92529 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SHC3Q92529 MIR6765-201ENST00000614092 87 ntBASIC25.3■■□□□ 1.64
SHC3Q92529 MIR6089-201ENST00000616698 64 ntBASIC25.3■■□□□ 1.64
SHC3Q92529 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHC3Q92529 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SHC3Q92529 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHC3Q92529 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.28■■□□□ 1.64
SHC3Q92529 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms