Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 DAL3YIR032C 588 nt5.8□□□□□ -1.48
RPN8Q08723 GON7YJL184W 372 nt5.8□□□□□ -1.48
RPN8Q08723 TSA1YML028W 591 nt5.8□□□□□ -1.48
RPN8Q08723 YOL131WYOL131W 327 nt5.8□□□□□ -1.48
RPN8Q08723 MRK1YDL079C 1506 nt5.79□□□□□ -1.48
RPN8Q08723 IRS4YKR019C 1848 nt5.79□□□□□ -1.48
RPN8Q08723 CIN4YMR138W 576 nt5.79□□□□□ -1.48
RPN8Q08723 AAD15YOL165C 432 nt5.79□□□□□ -1.48
RPN8Q08723 UBA1YKL210W 3075 nt5.78□□□□□ -1.48
RPN8Q08723 YMR119W-AYMR119W-A 375 nt5.78□□□□□ -1.48
RPN8Q08723 CRZ1YNL027W 2037 nt5.78□□□□□ -1.48
RPN8Q08723 ATG12YBR217W 561 nt5.78□□□□□ -1.48
RPN8Q08723 TBF1YPL128C 1689 nt5.78□□□□□ -1.48
RPN8Q08723 GAT1YFL021W 1533 nt5.78□□□□□ -1.48
RPN8Q08723 GPB2YAL056W 2643 nt5.78□□□□□ -1.48
RPN8Q08723 CHO1YER026C 831 nt5.77□□□□□ -1.49
RPN8Q08723 TAL1YLR354C 1008 nt5.77□□□□□ -1.49
RPN8Q08723 FAT3YKL187C 2253 nt5.77□□□□□ -1.49
RPN8Q08723 CDC34YDR054C 888 nt5.76□□□□□ -1.49
RPN8Q08723 BCY1YIL033C 1251 nt5.76□□□□□ -1.49
RPN8Q08723 SSP120YLR250W 705 nt5.76□□□□□ -1.49
RPN8Q08723 HAP3YBL021C 435 nt5.76□□□□□ -1.49
RPN8Q08723 MDM31YHR194W 1740 nt5.76□□□□□ -1.49
RPN8Q08723 GUD1YDL238C 1470 nt5.76□□□□□ -1.49
RPN8Q08723 MDH3YDL078C 1032 nt5.75□□□□□ -1.49
RPN8Q08723 MRPL22YNL177C 930 nt5.75□□□□□ -1.49
RPN8Q08723 IFA38YBR159W 1044 nt5.75□□□□□ -1.49
RPN8Q08723 YCK1YHR135C 1617 nt5.74□□□□□ -1.49
RPN8Q08723 COR1YBL045C 1374 nt5.74□□□□□ -1.49
RPN8Q08723 TRP3YKL211C 1455 nt5.74□□□□□ -1.49
RPN8Q08723 WHI2YOR043W 1461 nt5.74□□□□□ -1.49
RPN8Q08723 YME1YPR024W 2244 nt5.74□□□□□ -1.49
RPN8Q08723 EMW1YNL313C 2715 nt5.73□□□□□ -1.49
RPN8Q08723 GDA1YEL042W 1557 nt5.73□□□□□ -1.49
RPN8Q08723 YDL022C-AYDL022C-A 249 nt5.73□□□□□ -1.49
RPN8Q08723 RPT3YDR394W 1287 nt5.73□□□□□ -1.49
RPN8Q08723 NPA3YJR072C 1158 nt5.73□□□□□ -1.49
RPN8Q08723 YHM2YMR241W 945 nt5.73□□□□□ -1.49
RPN8Q08723 IDP3YNL009W 1263 nt5.73□□□□□ -1.49
RPN8Q08723 GEX1YCL073C 1848 nt5.73□□□□□ -1.49
RPN8Q08723 GEX2YKR106W 1848 nt5.73□□□□□ -1.49
RPN8Q08723 VTC2YFL004W 2487 nt5.73□□□□□ -1.49
RPN8Q08723 ATP1YBL099W 1638 nt5.73□□□□□ -1.49
RPN8Q08723 RAD24YER173W 1980 nt5.73□□□□□ -1.49
RPN8Q08723 ASN1YPR145W 1719 nt5.72□□□□□ -1.49
RPN8Q08723 COX20YDR231C 618 nt5.72□□□□□ -1.49
RPN8Q08723 YPR114WYPR114W 948 nt5.72□□□□□ -1.49
RPN8Q08723 RGT1YKL038W 3513 nt5.72□□□□□ -1.49
RPN8Q08723 ASH1YKL185W 1767 nt5.72□□□□□ -1.49
RPN8Q08723 IME2YJL106W 1938 nt5.72□□□□□ -1.49
RPN8Q08723 CST6YIL036W 1764 nt5.71□□□□□ -1.5
RPN8Q08723 ROG3YFR022W 2202 nt5.71□□□□□ -1.5
RPN8Q08723 GPT2YKR067W 2232 nt5.71□□□□□ -1.5
RPN8Q08723 RFA1YAR007C 1866 nt5.71□□□□□ -1.5
RPN8Q08723 VTH1YIL173W 4650 nt5.7□□□□□ -1.5
RPN8Q08723 VTH2YJL222W 4650 nt5.7□□□□□ -1.5
RPN8Q08723 VCX1YDL128W 1236 nt5.7□□□□□ -1.5
RPN8Q08723 YGR022CYGR022C 330 nt5.7□□□□□ -1.5
RPN8Q08723 SUP2tY(GUA)D 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP11tY(GUA)F1 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP6tY(GUA)F2 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP7tY(GUA)J1 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP4tY(GUA)J2 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP5tY(GUA)M1 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP8tY(GUA)M2 75 nt5.7□□□□□ -1.5
RPN8Q08723 SUP3tY(GUA)O 75 nt5.7□□□□□ -1.5
RPN8Q08723 RNR3YIL066C 2610 nt5.7□□□□□ -1.5
RPN8Q08723 ALT1YLR089C 1779 nt5.7□□□□□ -1.5
RPN8Q08723 FRS2YFL022C 1512 nt5.69□□□□□ -1.5
RPN8Q08723 KKQ8YKL168C 2175 nt5.69□□□□□ -1.5
RPN8Q08723 YEH1YLL012W 1722 nt5.69□□□□□ -1.5
RPN8Q08723 PNP1YLR209C 936 nt5.69□□□□□ -1.5
RPN8Q08723 RAD3YER171W 2337 nt5.69□□□□□ -1.5
RPN8Q08723 MAL11YGR289C 1851 nt5.68□□□□□ -1.5
RPN8Q08723 COG1YGL223C 1254 nt5.68□□□□□ -1.5
RPN8Q08723 FAF1YIL019W 1041 nt5.68□□□□□ -1.5
RPN8Q08723 PAN6YIL145C 930 nt5.68□□□□□ -1.5
RPN8Q08723 YLR296WYLR296W 327 nt5.68□□□□□ -1.5
RPN8Q08723 UBC11YOR339C 471 nt5.68□□□□□ -1.5
RPN8Q08723 ENT2YLR206W 1842 nt5.68□□□□□ -1.5
RPN8Q08723 PKC1YBL105C 3456 nt5.67□□□□□ -1.5
RPN8Q08723 YFL064CYFL064C 525 nt5.67□□□□□ -1.5
RPN8Q08723 SYN8YAL014C 768 nt5.67□□□□□ -1.5
RPN8Q08723 YJL193WYJL193W 1209 nt5.67□□□□□ -1.5
RPN8Q08723 PFA3YNL326C 1011 nt5.67□□□□□ -1.5
RPN8Q08723 RPN7YPR108W 1290 nt5.67□□□□□ -1.5
RPN8Q08723 YPR202WYPR202W 717 nt5.67□□□□□ -1.5
RPN8Q08723 PAP2YOL115W 1755 nt5.67□□□□□ -1.5
RPN8Q08723 GUP2YPL189W 1830 nt5.67□□□□□ -1.5
RPN8Q08723 SNZ3YFL059W 897 nt5.66□□□□□ -1.5
RPN8Q08723 SNZ2YNL333W 897 nt5.66□□□□□ -1.5
RPN8Q08723 CPA1YOR303W 1236 nt5.66□□□□□ -1.5
RPN8Q08723 ERI1YPL096C-A 207 nt5.66□□□□□ -1.5
RPN8Q08723 YBR144CYBR144C 315 nt5.66□□□□□ -1.5
RPN8Q08723 SET5YHR207C 1581 nt5.66□□□□□ -1.5
RPN8Q08723 YRF1-4YLR466W 4149 nt5.66□□□□□ -1.5
RPN8Q08723 tR(ACG)DtR(ACG)D 73 nt5.65□□□□□ -1.5
RPN8Q08723 tR(ACG)EtR(ACG)E 73 nt5.65□□□□□ -1.5
RPN8Q08723 tR(ACG)KtR(ACG)K 73 nt5.65□□□□□ -1.5
RPN8Q08723 tR(ACG)LtR(ACG)L 73 nt5.65□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms