Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YHR218W-AYHR218W-A 318 nt6.39□□□□□ -1.39
MSH1P25846 YLR361C-AYLR361C-A 297 nt6.39□□□□□ -1.39
MSH1P25846 YMR122CYMR122C 375 nt6.39□□□□□ -1.39
MSH1P25846 RFA2YNL312W 822 nt6.39□□□□□ -1.39
MSH1P25846 PFA3YNL326C 1011 nt6.39□□□□□ -1.39
MSH1P25846 YBL112CYBL112C 318 nt6.39□□□□□ -1.39
MSH1P25846 MED4YOR174W 855 nt6.39□□□□□ -1.39
MSH1P25846 HEM15YOR176W 1182 nt6.39□□□□□ -1.39
MSH1P25846 YBR027CYBR027C 333 nt6.39□□□□□ -1.39
MSH1P25846 FRS2YFL022C 1512 nt6.39□□□□□ -1.39
MSH1P25846 YIR007WYIR007W 2295 nt6.38□□□□□ -1.39
MSH1P25846 PEX7YDR142C 1128 nt6.38□□□□□ -1.39
MSH1P25846 SUP2tY(GUA)D 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP11tY(GUA)F1 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP6tY(GUA)F2 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP7tY(GUA)J1 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP4tY(GUA)J2 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP5tY(GUA)M1 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP8tY(GUA)M2 75 nt6.38□□□□□ -1.39
MSH1P25846 SUP3tY(GUA)O 75 nt6.38□□□□□ -1.39
MSH1P25846 YJU3YKL094W 942 nt6.38□□□□□ -1.39
MSH1P25846 TSR2YLR435W 618 nt6.38□□□□□ -1.39
MSH1P25846 YMR252CYMR252C 405 nt6.38□□□□□ -1.39
MSH1P25846 MSO1YNR049C 633 nt6.38□□□□□ -1.39
MSH1P25846 YOL079WYOL079W 399 nt6.38□□□□□ -1.39
MSH1P25846 FSF1YOR271C 984 nt6.38□□□□□ -1.39
MSH1P25846 UIP5YKR044W 1332 nt6.38□□□□□ -1.39
MSH1P25846 YEF1YEL041W 1488 nt6.38□□□□□ -1.39
MSH1P25846 HIS7YBR248C 1659 nt6.38□□□□□ -1.39
MSH1P25846 YEH1YLL012W 1722 nt6.38□□□□□ -1.39
MSH1P25846 RAD3YER171W 2337 nt6.37□□□□□ -1.39
MSH1P25846 YBR138CYBR138C 1575 nt6.37□□□□□ -1.39
MSH1P25846 HST3YOR025W 1344 nt6.37□□□□□ -1.39
MSH1P25846 FYV1YDR024W 486 nt6.37□□□□□ -1.39
MSH1P25846 RRP1YDR087C 837 nt6.37□□□□□ -1.39
MSH1P25846 SPG1YGR236C 288 nt6.37□□□□□ -1.39
MSH1P25846 POR1YNL055C 852 nt6.37□□□□□ -1.39
MSH1P25846 OSW2YLR054C 2175 nt6.37□□□□□ -1.39
MSH1P25846 ATP1YBL099W 1638 nt6.36□□□□□ -1.39
MSH1P25846 ZWF1YNL241C 1518 nt6.36□□□□□ -1.39
MSH1P25846 SRG1SRG1 551 nt6.36□□□□□ -1.39
MSH1P25846 MTQ1YNL063W 945 nt6.36□□□□□ -1.39
MSH1P25846 RPS3YNL178W 723 nt6.36□□□□□ -1.39
MSH1P25846 PHA2YNL316C 1005 nt6.36□□□□□ -1.39
MSH1P25846 ALG5YPL227C 1005 nt6.36□□□□□ -1.39
MSH1P25846 ENT2YLR206W 1842 nt6.36□□□□□ -1.39
MSH1P25846 PYC1YGL062W 3537 nt6.36□□□□□ -1.39
MSH1P25846 TRP3YKL211C 1455 nt6.35□□□□□ -1.39
MSH1P25846 SRP101YDR292C 1866 nt6.35□□□□□ -1.39
MSH1P25846 ECM7YLR443W 1347 nt6.35□□□□□ -1.39
MSH1P25846 GPI18YBR004C 1302 nt6.35□□□□□ -1.39
MSH1P25846 tR(ACG)DtR(ACG)D 73 nt6.35□□□□□ -1.39
MSH1P25846 tR(ACG)EtR(ACG)E 73 nt6.35□□□□□ -1.39
MSH1P25846 tR(ACG)KtR(ACG)K 73 nt6.35□□□□□ -1.39
MSH1P25846 tR(ACG)LtR(ACG)L 73 nt6.35□□□□□ -1.39
MSH1P25846 tR(ACG)OtR(ACG)O 73 nt6.35□□□□□ -1.39
MSH1P25846 YIR043CYIR043C 693 nt6.35□□□□□ -1.39
MSH1P25846 TDH2YJR009C 999 nt6.35□□□□□ -1.39
MSH1P25846 RRT7YLL030C 342 nt6.35□□□□□ -1.39
MSH1P25846 YLR296WYLR296W 327 nt6.35□□□□□ -1.39
MSH1P25846 ERC1YHR032W 1746 nt6.35□□□□□ -1.39
MSH1P25846 SCT1YBL011W 2280 nt6.34□□□□□ -1.39
MSH1P25846 PTC3YBL056W 1407 nt6.34□□□□□ -1.39
MSH1P25846 HSP78YDR258C 2436 nt6.34□□□□□ -1.39
MSH1P25846 MMS21YEL019C 804 nt6.34□□□□□ -1.39
MSH1P25846 CUP2YGL166W 678 nt6.34□□□□□ -1.39
MSH1P25846 WHI2YOR043W 1461 nt6.34□□□□□ -1.4
MSH1P25846 BCY1YIL033C 1251 nt6.33□□□□□ -1.4
MSH1P25846 GCV3YAL044C 513 nt6.33□□□□□ -1.4
MSH1P25846 YKR045CYKR045C 552 nt6.33□□□□□ -1.4
MSH1P25846 YML131WYML131W 1098 nt6.33□□□□□ -1.4
MSH1P25846 RDL2YOR286W 450 nt6.33□□□□□ -1.4
MSH1P25846 TIP41YPR040W 1071 nt6.33□□□□□ -1.4
MSH1P25846 CDC1YDR182W 1476 nt6.33□□□□□ -1.4
MSH1P25846 HSF1YGL073W 2502 nt6.33□□□□□ -1.4
MSH1P25846 RRP9YPR137W 1722 nt6.33□□□□□ -1.4
MSH1P25846 YAP1801YHR161C 1914 nt6.33□□□□□ -1.4
MSH1P25846 SIT1YEL065W 1887 nt6.32□□□□□ -1.4
MSH1P25846 RET1YOR207C 3450 nt6.32□□□□□ -1.4
MSH1P25846 WHI4YDL224C 1950 nt6.32□□□□□ -1.4
MSH1P25846 CDC34YDR054C 888 nt6.32□□□□□ -1.4
MSH1P25846 YER148W-AYER148W-A 579 nt6.32□□□□□ -1.4
MSH1P25846 IMD1YAR073W 1212 nt6.32□□□□□ -1.4
MSH1P25846 YNR040WYNR040W 771 nt6.32□□□□□ -1.4
MSH1P25846 TAE1YBR261C 699 nt6.32□□□□□ -1.4
MSH1P25846 GPD2YOL059W 1323 nt6.31□□□□□ -1.4
MSH1P25846 YDR187CYDR187C 519 nt6.31□□□□□ -1.4
MSH1P25846 RTT103YDR289C 1230 nt6.31□□□□□ -1.4
MSH1P25846 YJR115WYJR115W 510 nt6.31□□□□□ -1.4
MSH1P25846 SPG4YMR107W 348 nt6.31□□□□□ -1.4
MSH1P25846 RNH201YNL072W 924 nt6.31□□□□□ -1.4
MSH1P25846 RRS1YOR294W 612 nt6.31□□□□□ -1.4
MSH1P25846 GPB2YAL056W 2643 nt6.31□□□□□ -1.4
MSH1P25846 VTC2YFL004W 2487 nt6.31□□□□□ -1.4
MSH1P25846 YCR006CYCR006C 474 nt6.3□□□□□ -1.4
MSH1P25846 YBR124WYBR124W 360 nt6.3□□□□□ -1.4
MSH1P25846 CHL4YDR254W 1377 nt6.3□□□□□ -1.4
MSH1P25846 KRE9YJL174W 831 nt6.29□□□□□ -1.4
MSH1P25846 ASH1YKL185W 1767 nt6.29□□□□□ -1.4
MSH1P25846 ASN1YPR145W 1719 nt6.28□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 20.9 ms