Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ZC3H4Q9UPT8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ZC3H4Q9UPT8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 AL139010.1-201ENST00000454878 894 ntBASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 PTP4A1P2-201ENST00000546033 454 ntBASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZC3H4Q9UPT8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 FRMD8P1-201ENST00000440433 1524 ntBASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 IGHJ2P-201ENST00000454480 60 ntBASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 AC068587.3-201ENST00000526613 355 ntBASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 ENPP7P5-201ENST00000541031 1031 ntBASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZC3H4Q9UPT8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
ZC3H4Q9UPT8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 AC108860.2-201ENST00000562760 2183 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 FO393414.2-201ENST00000405153 598 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 BCRP2-202ENST00000447763 634 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 AC093724.1-201ENST00000448659 1027 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 BCRP6-201ENST00000510112 632 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 BCRP7-201ENST00000511549 544 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 AP001889.1-201ENST00000525414 633 ntBASIC19.7■□□□□ 0.74
ZC3H4Q9UPT8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms