Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 KRT17P7-201ENST00000451704 1104 ntBASIC16.5■□□□□ 0.23
MBD1Q9UIS9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 API5-211ENST00000534695 560 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AL132655.2-201ENST00000596276 594 ntBASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 MIR6752-201ENST00000618442 71 ntBASIC16.5■□□□□ 0.23
MBD1Q9UIS9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD1Q9UIS9 AC084018.2-201ENST00000613093 2607 ntBASIC16.49■□□□□ 0.23
MBD1Q9UIS9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 U91328.1-201ENST00000437528 223 ntBASIC16.49■□□□□ 0.23
MBD1Q9UIS9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 PCDHA14-201ENST00000506751 2298 ntBASIC16.49■□□□□ 0.23
MBD1Q9UIS9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD1Q9UIS9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 KRT8P39-201ENST00000396270 1433 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ARSEP1-201ENST00000420443 635 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AC105021.1-202ENST00000570572 669 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AL133215.2-201ENST00000609242 977 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AC005052.1-201ENST00000625181 2492 ntBASIC16.48■□□□□ 0.23
MBD1Q9UIS9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
MBD1Q9UIS9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms