Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.28■□□□□ 0.52
VTA1Q9NP79 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 AC020916.1-201ENST00000587762 1774 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 OR6D1P-202ENST00000641007 5290 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 INE1-201ENST00000456273 945 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 RN7SL752P-201ENST00000463779 287 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 GIMAP3P-201ENST00000495150 836 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 WASH4P-201ENST00000564273 1246 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 IGHV3-72-202ENST00000621503 303 ntBASIC18.27■□□□□ 0.52
VTA1Q9NP79 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VTA1Q9NP79 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTA1Q9NP79 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VTA1Q9NP79 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VTA1Q9NP79 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
VTA1Q9NP79 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VTA1Q9NP79 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 FO393414.2-201ENST00000405153 598 ntBASIC18.26■□□□□ 0.51
VTA1Q9NP79 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 AC011495.1-201ENST00000498085 584 ntBASIC18.26■□□□□ 0.51
VTA1Q9NP79 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTA1Q9NP79 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VTA1Q9NP79 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 AL512384.1-201ENST00000406683 331 ntBASIC18.25■□□□□ 0.51
VTA1Q9NP79 ARSEP1-201ENST00000420443 635 ntBASIC18.25■□□□□ 0.51
VTA1Q9NP79 GPR53P-205ENST00000457298 1084 ntBASIC18.25■□□□□ 0.51
VTA1Q9NP79 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 AC092337.1-201ENST00000568699 1129 ntBASIC18.25■□□□□ 0.51
VTA1Q9NP79 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms