Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 RPL37AP1-201ENST00000412502 279 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC004890.2-204ENST00000481968 304 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 SPDYE18-201ENST00000510091 1050 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 RNA5SP410-201ENST00000516285 106 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC069120.2-201ENST00000524091 540 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AP005018.1-201ENST00000525475 301 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC009407.1-201ENST00000568958 598 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC015911.4-201ENST00000588022 1070 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC013467.2-201ENST00000605472 835 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC021097.1-201ENST00000607902 574 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC008738.7-201ENST00000609744 511 ntBASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP4-3Q9BYR4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 GPAA1P2-202ENST00000606848 1787 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms