Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAAF1Q9BRP4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.45■□□□□ 0.38
PAAF1Q9BRP4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAAF1Q9BRP4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.45■□□□□ 0.38
PAAF1Q9BRP4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SPDYE22P-201ENST00000582158 798 ntBASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
PAAF1Q9BRP4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 PIN1P1-201ENST00000412108 996 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC005034.1-201ENST00000426657 489 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 GNAQP1-201ENST00000444815 1067 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 SPDYE18-201ENST00000510091 1050 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC004233.3-201ENST00000607794 1269 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC012645.4-201ENST00000610691 1061 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AL662799.1-202ENST00000614205 422 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AL035252.4-201ENST00000624174 288 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 ALOX12P2-203ENST00000570921 1945 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AC009053.2-201ENST00000563701 2365 ntBASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAAF1Q9BRP4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 AL136982.4-201ENST00000437689 1740 ntBASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.42■□□□□ 0.38
PAAF1Q9BRP4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms