Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.14□□□□□ -0.15
COL12A1Q99715 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 AL096828.3-201ENST00000615354 462 ntBASIC14.14□□□□□ -0.15
COL12A1Q99715 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.14□□□□□ -0.15
COL12A1Q99715 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.14□□□□□ -0.15
COL12A1Q99715 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
COL12A1Q99715 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.14□□□□□ -0.15
COL12A1Q99715 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.14□□□□□ -0.15
COL12A1Q99715 AC074044.1-201ENST00000609673 707 ntBASIC14.14□□□□□ -0.15
COL12A1Q99715 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 AC079336.7-201ENST00000623428 1078 ntBASIC14.14□□□□□ -0.15
COL12A1Q99715 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COL12A1Q99715 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.14□□□□□ -0.15
COL12A1Q99715 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 AC006480.2-201ENST00000609770 1337 ntBASIC14.14□□□□□ -0.15
COL12A1Q99715 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL12A1Q99715 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.13□□□□□ -0.15
COL12A1Q99715 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
COL12A1Q99715 PP12613-201ENST00000424958 2230 ntBASIC14.13□□□□□ -0.15
COL12A1Q99715 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AL442647.2-201ENST00000429864 857 ntBASIC14.13□□□□□ -0.15
COL12A1Q99715 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.13□□□□□ -0.15
COL12A1Q99715 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AF254983.2-201ENST00000612331 135 ntBASIC14.13□□□□□ -0.15
COL12A1Q99715 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 AC125604.1-201ENST00000496255 707 ntBASIC14.13□□□□□ -0.15
COL12A1Q99715 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COL12A1Q99715 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.13□□□□□ -0.15
COL12A1Q99715 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.13□□□□□ -0.15
COL12A1Q99715 AC005357.2-202ENST00000590507 1060 ntBASIC14.13□□□□□ -0.15
COL12A1Q99715 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL12A1Q99715 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.13□□□□□ -0.15
COL12A1Q99715 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COL12A1Q99715 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.12□□□□□ -0.15
COL12A1Q99715 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COL12A1Q99715 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.12□□□□□ -0.15
COL12A1Q99715 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL12A1Q99715 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.12□□□□□ -0.15
COL12A1Q99715 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL12A1Q99715 MTX1P1-201ENST00000440904 838 ntBASIC14.12□□□□□ -0.15
COL12A1Q99715 AC141586.1-203ENST00000567242 366 ntBASIC14.12□□□□□ -0.15
COL12A1Q99715 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL12A1Q99715 MIR6069-201ENST00000620069 79 ntBASIC14.12□□□□□ -0.15
COL12A1Q99715 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.12□□□□□ -0.15
COL12A1Q99715 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL12A1Q99715 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms