Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 Z97205.2-201ENST00000564697 1639 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.59□□□□□ -0.07
SPENQ96T58 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.59□□□□□ -0.07
SPENQ96T58 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 BCRP2-202ENST00000447763 634 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 BCRP6-201ENST00000510112 632 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 BCRP7-201ENST00000511549 544 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
SPENQ96T58 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPENQ96T58 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.58□□□□□ -0.07
SPENQ96T58 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.58□□□□□ -0.07
SPENQ96T58 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPENQ96T58 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.58□□□□□ -0.08
SPENQ96T58 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.58□□□□□ -0.08
SPENQ96T58 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.58□□□□□ -0.08
SPENQ96T58 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.58□□□□□ -0.08
SPENQ96T58 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.58□□□□□ -0.08
SPENQ96T58 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
SPENQ96T58 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SPENQ96T58 AC092364.2-201ENST00000596710 2692 ntBASIC14.58□□□□□ -0.08
SPENQ96T58 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 MIR1247-201ENST00000408206 136 ntBASIC14.58□□□□□ -0.08
SPENQ96T58 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.58□□□□□ -0.08
SPENQ96T58 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SPENQ96T58 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 AC233724.13-201ENST00000598383 410 ntBASIC14.58□□□□□ -0.08
SPENQ96T58 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SPENQ96T58 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SPENQ96T58 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPENQ96T58 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.58□□□□□ -0.08
SPENQ96T58 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SPENQ96T58 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.57□□□□□ -0.08
SPENQ96T58 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.57□□□□□ -0.08
SPENQ96T58 FTH1P14-201ENST00000482930 551 ntBASIC14.57□□□□□ -0.08
SPENQ96T58 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 AP000812.2-201ENST00000538934 718 ntBASIC14.57□□□□□ -0.08
SPENQ96T58 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.57□□□□□ -0.08
SPENQ96T58 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.57□□□□□ -0.08
SPENQ96T58 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.57□□□□□ -0.08
SPENQ96T58 KRT8P39-201ENST00000396270 1433 ntBASIC14.57□□□□□ -0.08
SPENQ96T58 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SPENQ96T58 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.57□□□□□ -0.08
SPENQ96T58 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.57□□□□□ -0.08
SPENQ96T58 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.57□□□□□ -0.08
SPENQ96T58 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SPENQ96T58 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SPENQ96T58 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SPENQ96T58 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPENQ96T58 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.57□□□□□ -0.08
SPENQ96T58 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SPENQ96T58 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 MIR663B-201ENST00000408361 115 ntBASIC14.56□□□□□ -0.08
SPENQ96T58 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.56□□□□□ -0.08
SPENQ96T58 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms