Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 UPF3AP3-201ENST00000420996 769 ntBASIC16.75■□□□□ 0.27
RTP4Q96DX8 AC007967.2-201ENST00000432613 625 ntBASIC16.75■□□□□ 0.27
RTP4Q96DX8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 AC010327.4-202ENST00000591484 748 ntBASIC16.75■□□□□ 0.27
RTP4Q96DX8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 AL139384.1-201ENST00000612143 3047 ntBASIC16.75■□□□□ 0.27
RTP4Q96DX8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 YBX2P1-201ENST00000394192 760 ntBASIC16.74■□□□□ 0.27
RTP4Q96DX8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 AC245100.5-201ENST00000452108 331 ntBASIC16.74■□□□□ 0.27
RTP4Q96DX8 KRT18P34-201ENST00000488218 1270 ntBASIC16.74■□□□□ 0.27
RTP4Q96DX8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 AL691403.2-201ENST00000618460 490 ntBASIC16.74■□□□□ 0.27
RTP4Q96DX8 AC055717.3-201ENST00000622967 595 ntBASIC16.74■□□□□ 0.27
RTP4Q96DX8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTP4Q96DX8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RTP4Q96DX8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 RPSAP43-201ENST00000402237 625 ntBASIC16.73■□□□□ 0.27
RTP4Q96DX8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 GPX1P2-201ENST00000429271 606 ntBASIC16.73■□□□□ 0.27
RTP4Q96DX8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms