Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 FAM197Y8-203ENST00000450145 560 ntBASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 AL356488.2-201ENST00000602755 427 ntBASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 GGTLC5P-201ENST00000617623 998 ntBASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 MIR1199-201ENST00000621445 119 ntBASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 AC008735.5-201ENST00000623544 497 ntBASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 AC008667.4-201ENST00000607370 168 ntBASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 AC148477.8-201ENST00000624298 468 ntBASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLHC1Q8NHS4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 IGHV3-65-201ENST00000523210 341 ntBASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 AC105339.3-201ENST00000560043 636 ntBASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 AC005412.3-201ENST00000580309 715 ntBASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.85■□□□□ 0.13
CLHC1Q8NHS4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms