Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 CRB3P1-201ENST00000449338 276 ntBASIC17.62■□□□□ 0.41
SMG8Q8ND04 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.62■□□□□ 0.41
SMG8Q8ND04 AC010336.2-201ENST00000564226 506 ntBASIC17.62■□□□□ 0.41
SMG8Q8ND04 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.62■□□□□ 0.41
SMG8Q8ND04 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMG8Q8ND04 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.62■□□□□ 0.41
SMG8Q8ND04 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.62■□□□□ 0.41
SMG8Q8ND04 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.62■□□□□ 0.41
SMG8Q8ND04 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 AC092171.3-201ENST00000610122 2651 ntBASIC17.62■□□□□ 0.41
SMG8Q8ND04 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMG8Q8ND04 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 ZNF890P-202ENST00000530367 1156 ntBASIC17.61■□□□□ 0.41
SMG8Q8ND04 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 MIR4321-201ENST00000592276 80 ntBASIC17.61■□□□□ 0.41
SMG8Q8ND04 AC026979.3-201ENST00000607315 403 ntBASIC17.61■□□□□ 0.41
SMG8Q8ND04 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 KRT8P12-202ENST00000472924 1397 ntBASIC17.61■□□□□ 0.41
SMG8Q8ND04 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.61■□□□□ 0.41
SMG8Q8ND04 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMG8Q8ND04 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMG8Q8ND04 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 FLJ38576-201ENST00000623820 2459 ntBASIC17.6■□□□□ 0.41
SMG8Q8ND04 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.6■□□□□ 0.41
SMG8Q8ND04 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMG8Q8ND04 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMG8Q8ND04 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMG8Q8ND04 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMG8Q8ND04 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMG8Q8ND04 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.59■□□□□ 0.41
SMG8Q8ND04 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SMG8Q8ND04 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMG8Q8ND04 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMG8Q8ND04 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMG8Q8ND04 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms