Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 AC098859.1-201ENST00000502915 1238 ntBASIC19.53■□□□□ 0.72
CTR9Q6PD62 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 MIR4453-201ENST00000584019 89 ntBASIC19.53■□□□□ 0.72
CTR9Q6PD62 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 SPDYE7P-202ENST00000420373 878 ntBASIC19.52■□□□□ 0.72
CTR9Q6PD62 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.52■□□□□ 0.72
CTR9Q6PD62 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 AL390955.2-201ENST00000603032 514 ntBASIC19.52■□□□□ 0.72
CTR9Q6PD62 AC018529.1-201ENST00000613063 361 ntBASIC19.52■□□□□ 0.72
CTR9Q6PD62 MIR6080-201ENST00000617359 66 ntBASIC19.52■□□□□ 0.72
CTR9Q6PD62 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTR9Q6PD62 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.52■□□□□ 0.72
CTR9Q6PD62 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTR9Q6PD62 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CTR9Q6PD62 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CTR9Q6PD62 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTR9Q6PD62 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTR9Q6PD62 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
CTR9Q6PD62 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CTR9Q6PD62 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTR9Q6PD62 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 FAM220BP-201ENST00000377689 816 ntBASIC19.51■□□□□ 0.71
CTR9Q6PD62 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 KLF2P3-201ENST00000451977 1087 ntBASIC19.51■□□□□ 0.71
CTR9Q6PD62 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 AC067863.1-201ENST00000494933 530 ntBASIC19.51■□□□□ 0.71
CTR9Q6PD62 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 AC005498.2-205ENST00000593218 784 ntBASIC19.51■□□□□ 0.71
CTR9Q6PD62 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTR9Q6PD62 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CTR9Q6PD62 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 HLA-H-201ENST00000383620 1096 ntBASIC19.5■□□□□ 0.71
CTR9Q6PD62 MIR770-201ENST00000390219 98 ntBASIC19.5■□□□□ 0.71
CTR9Q6PD62 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 AL589702.1-201ENST00000641229 1509 ntBASIC19.5■□□□□ 0.71
CTR9Q6PD62 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms