Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AC243562.1-201ENST00000560672 389 ntBASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 U82695.1-201ENST00000635752 1889 ntBASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 BX842568.4-201ENST00000421222 227 ntBASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 KRT8P48-201ENST00000515599 1220 ntBASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 AC073389.1-201ENST00000595595 795 ntBASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN20Q4JDL3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 FOXO1B-201ENST00000504678 1527 ntBASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 ELL2P1-201ENST00000413990 1906 ntBASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 ACTG1P14-201ENST00000446382 1122 ntBASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 DNAJB3-201ENST00000446806 729 ntBASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms