Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.45□□□□□ -0.1
TFF3Q07654 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TFF3Q07654 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TFF3Q07654 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.44□□□□□ -0.1
TFF3Q07654 AL080243.2-201ENST00000418783 582 ntBASIC14.44□□□□□ -0.1
TFF3Q07654 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.44□□□□□ -0.1
TFF3Q07654 MTND6P24-201ENST00000440466 518 ntBASIC14.44□□□□□ -0.1
TFF3Q07654 ATP5G2P4-201ENST00000442175 420 ntBASIC14.44□□□□□ -0.1
TFF3Q07654 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 AC098859.1-201ENST00000502915 1238 ntBASIC14.44□□□□□ -0.1
TFF3Q07654 AC105021.1-202ENST00000570572 669 ntBASIC14.44□□□□□ -0.1
TFF3Q07654 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.44□□□□□ -0.1
TFF3Q07654 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.44□□□□□ -0.1
TFF3Q07654 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.44□□□□□ -0.1
TFF3Q07654 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.44□□□□□ -0.1
TFF3Q07654 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.44□□□□□ -0.1
TFF3Q07654 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TFF3Q07654 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TFF3Q07654 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TFF3Q07654 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.44□□□□□ -0.1
TFF3Q07654 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.43□□□□□ -0.1
TFF3Q07654 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.43□□□□□ -0.1
TFF3Q07654 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.43□□□□□ -0.1
TFF3Q07654 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.43□□□□□ -0.1
TFF3Q07654 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.43□□□□□ -0.1
TFF3Q07654 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.43□□□□□ -0.1
TFF3Q07654 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.43□□□□□ -0.1
TFF3Q07654 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.43□□□□□ -0.1
TFF3Q07654 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TFF3Q07654 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.43□□□□□ -0.1
TFF3Q07654 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TFF3Q07654 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TFF3Q07654 BTBD7P1-201ENST00000447253 1453 ntBASIC14.43□□□□□ -0.1
TFF3Q07654 AC138969.3-201ENST00000546612 1459 ntBASIC14.43□□□□□ -0.1
TFF3Q07654 AC138932.2-201ENST00000548268 1459 ntBASIC14.43□□□□□ -0.1
TFF3Q07654 AC126755.4-201ENST00000549796 1459 ntBASIC14.43□□□□□ -0.1
TFF3Q07654 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TFF3Q07654 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms