Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM4P67936 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TPM4P67936 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM4P67936 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM4P67936 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TPM4P67936 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.54■□□□□ 0.56
TPM4P67936 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM4P67936 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
TPM4P67936 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM4P67936 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 AC126177.1-201ENST00000547829 2218 ntBASIC18.54■□□□□ 0.56
TPM4P67936 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TPM4P67936 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TPM4P67936 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 SNX33P1-201ENST00000592116 1762 ntBASIC18.53■□□□□ 0.56
TPM4P67936 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 ABCD1P5-201ENST00000445663 754 ntBASIC18.53■□□□□ 0.56
TPM4P67936 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.53■□□□□ 0.56
TPM4P67936 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TPM4P67936 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.53■□□□□ 0.56
TPM4P67936 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.53■□□□□ 0.56
TPM4P67936 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.53■□□□□ 0.56
TPM4P67936 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.53■□□□□ 0.56
TPM4P67936 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 AC016734.2-201ENST00000624325 1377 ntBASIC18.53■□□□□ 0.56
TPM4P67936 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM4P67936 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM4P67936 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 AP005117.1-202ENST00000581724 1908 ntBASIC18.53■□□□□ 0.56
TPM4P67936 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM4P67936 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.52■□□□□ 0.56
TPM4P67936 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TPM4P67936 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
TPM4P67936 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TPM4P67936 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.52■□□□□ 0.56
TPM4P67936 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC18.52■□□□□ 0.56
TPM4P67936 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 NCF1C-201ENST00000438382 1427 ntBASIC18.52■□□□□ 0.56
TPM4P67936 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.52■□□□□ 0.56
TPM4P67936 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TPM4P67936 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TPM4P67936 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM4P67936 DRAXINP1-201ENST00000437611 948 ntBASIC18.52■□□□□ 0.56
TPM4P67936 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.52■□□□□ 0.56
TPM4P67936 MPDU1-223ENST00000582151 728 ntBASIC18.52■□□□□ 0.56
TPM4P67936 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TPM4P67936 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.52■□□□□ 0.56
TPM4P67936 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TPM4P67936 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.52■□□□□ 0.56
TPM4P67936 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
TPM4P67936 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TPM4P67936 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
TPM4P67936 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM4P67936 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TPM4P67936 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM4P67936 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
TPM4P67936 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM4P67936 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms