Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN6P56747 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 TTTY23B-201ENST00000442790 549 ntBASIC15.75■□□□□ 0.11
CLDN6P56747 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 AC011495.1-201ENST00000498085 584 ntBASIC15.75■□□□□ 0.11
CLDN6P56747 AC098859.1-201ENST00000502915 1238 ntBASIC15.75■□□□□ 0.11
CLDN6P56747 AC092658.1-201ENST00000505836 891 ntBASIC15.75■□□□□ 0.11
CLDN6P56747 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
CLDN6P56747 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN6P56747 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN6P56747 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 AL512343.1-201ENST00000605837 169 ntBASIC15.75■□□□□ 0.11
CLDN6P56747 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.75■□□□□ 0.11
CLDN6P56747 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 REXO1L6P-201ENST00000603433 1515 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 AC116353.5-201ENST00000638148 1699 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN6P56747 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN6P56747 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN6P56747 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 AC119751.2-201ENST00000504529 210 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 SNX29P1-201ENST00000548357 1007 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 AC023310.3-201ENST00000557027 670 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 AC100756.1-201ENST00000562736 682 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 AC138749.3-201ENST00000567691 622 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN6P56747 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CLDN6P56747 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 AC116165.1-201ENST00000611806 668 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN6P56747 AL033527.4-201ENST00000641026 673 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN6P56747 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 SLC7A15P-201ENST00000424028 1363 ntBASIC15.74■□□□□ 0.11
CLDN6P56747 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN6P56747 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN6P56747 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CLDN6P56747 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms