Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC28.84■■■□□ 2.21
SMARCA4P51532 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC28.84■■■□□ 2.21
SMARCA4P51532 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC28.84■■■□□ 2.21
SMARCA4P51532 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC28.84■■■□□ 2.21
SMARCA4P51532 AL021578.1-201ENST00000613646 709 ntBASIC28.84■■■□□ 2.21
SMARCA4P51532 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC28.84■■■□□ 2.21
SMARCA4P51532 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC28.84■■■□□ 2.21
SMARCA4P51532 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
SMARCA4P51532 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCA4P51532 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC28.84■■■□□ 2.21
SMARCA4P51532 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SMARCA4P51532 LETM1P2-201ENST00000597330 2178 ntBASIC28.84■■■□□ 2.21
SMARCA4P51532 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCA4P51532 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC28.84■■■□□ 2.21
SMARCA4P51532 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC28.84■■■□□ 2.21
SMARCA4P51532 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCA4P51532 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 ELP6-209ENST00000446787 894 ntTSL 3 BASIC28.83■■■□□ 2.21
SMARCA4P51532 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC28.83■■■□□ 2.21
SMARCA4P51532 AC243562.2-201ENST00000561247 970 ntBASIC28.83■■■□□ 2.21
SMARCA4P51532 PRKN-211ENST00000615065 261 ntTSL 5 BASIC28.83■■■□□ 2.21
SMARCA4P51532 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC28.83■■■□□ 2.21
SMARCA4P51532 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 AGER-206ENST00000375070 1463 ntTSL 5 BASIC28.83■■■□□ 2.21
SMARCA4P51532 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SMARCA4P51532 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC28.83■■■□□ 2.21
SMARCA4P51532 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
SMARCA4P51532 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCA4P51532 REXO1L8P-201ENST00000604378 1897 ntBASIC28.83■■■□□ 2.21
SMARCA4P51532 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC28.83■■■□□ 2.21
SMARCA4P51532 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC28.83■■■□□ 2.21
SMARCA4P51532 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
SMARCA4P51532 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC28.83■■■□□ 2.21
SMARCA4P51532 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC28.83■■■□□ 2.21
SMARCA4P51532 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCA4P51532 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.2
SMARCA4P51532 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC28.82■■■□□ 2.2
SMARCA4P51532 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC28.82■■■□□ 2.2
SMARCA4P51532 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 TEX30-203ENST00000376022 828 ntTSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 USP40-206ENST00000443711 628 ntTSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC28.82■■■□□ 2.2
SMARCA4P51532 KRT8P13-201ENST00000463294 1010 ntBASIC28.82■■■□□ 2.2
SMARCA4P51532 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC28.82■■■□□ 2.2
SMARCA4P51532 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
SMARCA4P51532 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCA4P51532 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC28.82■■■□□ 2.2
SMARCA4P51532 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
SMARCA4P51532 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC28.82■■■□□ 2.2
SMARCA4P51532 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCA4P51532 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCA4P51532 AC092506.1-202ENST00000401022 528 ntBASIC28.81■■■□□ 2.2
SMARCA4P51532 AC136604.1-201ENST00000418535 575 ntBASIC28.81■■■□□ 2.2
SMARCA4P51532 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCA4P51532 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
SMARCA4P51532 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCA4P51532 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
SMARCA4P51532 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCA4P51532 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC28.81■■■□□ 2.2
SMARCA4P51532 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC28.81■■■□□ 2.2
SMARCA4P51532 AC134312.5-201ENST00000568031 1313 ntBASIC28.81■■■□□ 2.2
SMARCA4P51532 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC28.81■■■□□ 2.2
SMARCA4P51532 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC28.81■■■□□ 2.2
SMARCA4P51532 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
SMARCA4P51532 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
SMARCA4P51532 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCA4P51532 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCA4P51532 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCA4P51532 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCA4P51532 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCA4P51532 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC28.8■■■□□ 2.2
SMARCA4P51532 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCA4P51532 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC28.8■■■□□ 2.2
SMARCA4P51532 AC093433.1-201ENST00000458048 571 ntBASIC28.8■■■□□ 2.2
SMARCA4P51532 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC28.8■■■□□ 2.2
SMARCA4P51532 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC28.8■■■□□ 2.2
SMARCA4P51532 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
SMARCA4P51532 AC009486.1-201ENST00000569860 813 ntBASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms