Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPT1AP50416 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPT1AP50416 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CPT1AP50416 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.1■□□□□ 0.49
CPT1AP50416 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.1■□□□□ 0.49
CPT1AP50416 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.1■□□□□ 0.49
CPT1AP50416 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.1■□□□□ 0.49
CPT1AP50416 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CPT1AP50416 AC017083.2-201ENST00000608069 979 ntBASIC18.1■□□□□ 0.49
CPT1AP50416 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.1■□□□□ 0.49
CPT1AP50416 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPT1AP50416 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.09■□□□□ 0.49
CPT1AP50416 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 AC005622.1-201ENST00000636801 1703 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.09■□□□□ 0.49
CPT1AP50416 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.09■□□□□ 0.49
CPT1AP50416 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.09■□□□□ 0.49
CPT1AP50416 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPT1AP50416 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.09■□□□□ 0.49
CPT1AP50416 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 FO393414.2-201ENST00000405153 598 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPT1AP50416 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.09■□□□□ 0.49
CPT1AP50416 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 AC123567.1-201ENST00000548294 1261 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.09■□□□□ 0.49
CPT1AP50416 AC106886.1-201ENST00000568660 600 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 AC092337.1-201ENST00000568699 1129 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.09■□□□□ 0.49
CPT1AP50416 MIR4321-201ENST00000592276 80 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.09■□□□□ 0.49
CPT1AP50416 AC093726.1-201ENST00000608064 963 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 AC074044.1-201ENST00000609673 707 ntBASIC18.09■□□□□ 0.49
CPT1AP50416 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CPT1AP50416 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CPT1AP50416 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPT1AP50416 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.08■□□□□ 0.49
CPT1AP50416 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPT1AP50416 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CPT1AP50416 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CPT1AP50416 AC026471.1-201ENST00000564629 3026 ntBASIC18.08■□□□□ 0.49
CPT1AP50416 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.08■□□□□ 0.48
CPT1AP50416 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.08■□□□□ 0.48
CPT1AP50416 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.08■□□□□ 0.48
CPT1AP50416 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.08■□□□□ 0.48
CPT1AP50416 TIMM17BP1-201ENST00000545713 516 ntBASIC18.08■□□□□ 0.48
CPT1AP50416 RRP7BP-205ENST00000566851 833 ntBASIC18.08■□□□□ 0.48
CPT1AP50416 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.08■□□□□ 0.48
CPT1AP50416 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPT1AP50416 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CPT1AP50416 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.08■□□□□ 0.48
CPT1AP50416 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CPT1AP50416 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.08■□□□□ 0.48
CPT1AP50416 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms