Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA4P43681 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA4P43681 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA4P43681 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA4P43681 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CHRNA4P43681 KRT18P34-201ENST00000488218 1270 ntBASIC16.6■□□□□ 0.25
CHRNA4P43681 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA4P43681 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRNA4P43681 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.6■□□□□ 0.25
CHRNA4P43681 AC112191.1-201ENST00000523689 701 ntBASIC16.6■□□□□ 0.25
CHRNA4P43681 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.6■□□□□ 0.25
CHRNA4P43681 AC092902.6-201ENST00000641783 218 ntBASIC16.6■□□□□ 0.25
CHRNA4P43681 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA4P43681 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA4P43681 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 WASH6P-202ENST00000359512 1437 ntBASIC16.6■□□□□ 0.25
CHRNA4P43681 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA4P43681 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA4P43681 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA4P43681 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA4P43681 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 MCCD1P2-201ENST00000423228 335 ntBASIC16.59■□□□□ 0.25
CHRNA4P43681 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AC004832.2-201ENST00000426397 482 ntBASIC16.59■□□□□ 0.25
CHRNA4P43681 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA4P43681 ALG1L5P-201ENST00000482043 771 ntBASIC16.59■□□□□ 0.25
CHRNA4P43681 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.59■□□□□ 0.25
CHRNA4P43681 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA4P43681 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA4P43681 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms