Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.09■□□□□ 0.81
PDE6BP35913 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.09■□□□□ 0.81
PDE6BP35913 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.09■□□□□ 0.81
PDE6BP35913 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.09■□□□□ 0.81
PDE6BP35913 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 KRT8P22-201ENST00000562317 1415 ntBASIC20.09■□□□□ 0.81
PDE6BP35913 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6BP35913 KRT8P44-201ENST00000441609 1350 ntBASIC20.08■□□□□ 0.81
PDE6BP35913 CYP4F24P-201ENST00000586049 1580 ntBASIC20.08■□□□□ 0.81
PDE6BP35913 AC093525.8-201ENST00000624099 1342 ntBASIC20.08■□□□□ 0.81
PDE6BP35913 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDE6BP35913 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.08■□□□□ 0.81
PDE6BP35913 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDE6BP35913 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDE6BP35913 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDE6BP35913 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDE6BP35913 AL162726.2-201ENST00000438986 1017 ntBASIC20.08■□□□□ 0.81
PDE6BP35913 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PDE6BP35913 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.08■□□□□ 0.81
PDE6BP35913 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.08■□□□□ 0.81
PDE6BP35913 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.08■□□□□ 0.81
PDE6BP35913 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.08■□□□□ 0.81
PDE6BP35913 GPR182-203ENST00000622922 591 ntBASIC20.08■□□□□ 0.81
PDE6BP35913 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PDE6BP35913 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDE6BP35913 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PDE6BP35913 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDE6BP35913 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDE6BP35913 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 NEFHP1-201ENST00000412845 2629 ntBASIC20.07■□□□□ 0.8
PDE6BP35913 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PDE6BP35913 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 AL390961.4-201ENST00000623958 2535 ntBASIC20.07■□□□□ 0.8
PDE6BP35913 Z97205.2-201ENST00000564697 1639 ntBASIC20.07■□□□□ 0.8
PDE6BP35913 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.07■□□□□ 0.8
PDE6BP35913 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PDE6BP35913 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.07■□□□□ 0.8
PDE6BP35913 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.07■□□□□ 0.8
PDE6BP35913 AL442647.2-201ENST00000429864 857 ntBASIC20.07■□□□□ 0.8
PDE6BP35913 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.07■□□□□ 0.8
PDE6BP35913 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.07■□□□□ 0.8
PDE6BP35913 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.07■□□□□ 0.8
PDE6BP35913 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PDE6BP35913 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6BP35913 TUBB1P2-201ENST00000422712 1306 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 TUBB1P1-201ENST00000503144 1300 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.06■□□□□ 0.8
PDE6BP35913 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PDE6BP35913 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDE6BP35913 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDE6BP35913 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 ACTG1P3-201ENST00000431775 1114 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 AL136982.4-201ENST00000437689 1740 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.06■□□□□ 0.8
PDE6BP35913 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.06■□□□□ 0.8
PDE6BP35913 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.06■□□□□ 0.8
PDE6BP35913 AC036164.1-201ENST00000570544 333 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 AC133539.2-201ENST00000604757 467 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 AL391069.4-201ENST00000609583 481 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 AL022328.1-201ENST00000610050 478 ntBASIC20.06■□□□□ 0.8
PDE6BP35913 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.06■□□□□ 0.8
PDE6BP35913 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.06■□□□□ 0.8
PDE6BP35913 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms