Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
PTPN7P35236 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 CRYGEP-201ENST00000412192 528 ntBASIC17.01■□□□□ 0.31
PTPN7P35236 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.01■□□□□ 0.31
PTPN7P35236 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PTPN7P35236 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 AC010507.1-201ENST00000633895 436 ntBASIC17.01■□□□□ 0.31
PTPN7P35236 AC008741.2-201ENST00000612792 3115 ntBASIC17.01■□□□□ 0.31
PTPN7P35236 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PTPN7P35236 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN7P35236 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN7P35236 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN7P35236 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
PTPN7P35236 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17■□□□□ 0.31
PTPN7P35236 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17■□□□□ 0.31
PTPN7P35236 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 CD63-204ENST00000546939 779 ntTSL 3 BASIC17■□□□□ 0.31
PTPN7P35236 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 AL009183.1-201ENST00000603760 355 ntBASIC17■□□□□ 0.31
PTPN7P35236 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17■□□□□ 0.31
PTPN7P35236 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN7P35236 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17■□□□□ 0.31
PTPN7P35236 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17■□□□□ 0.31
PTPN7P35236 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN7P35236 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN7P35236 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN7P35236 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
PTPN7P35236 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN7P35236 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN7P35236 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN7P35236 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN7P35236 MRPL3P1-201ENST00000400109 1033 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms