Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.78■□□□□ 0.76
LMNB1P20700 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LMNB1P20700 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LMNB1P20700 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.77■□□□□ 0.76
LMNB1P20700 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.77■□□□□ 0.76
LMNB1P20700 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.77■□□□□ 0.76
LMNB1P20700 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.77■□□□□ 0.76
LMNB1P20700 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.77■□□□□ 0.76
LMNB1P20700 AC036164.1-201ENST00000570544 333 ntBASIC19.77■□□□□ 0.76
LMNB1P20700 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.77■□□□□ 0.76
LMNB1P20700 AC020765.3-201ENST00000613051 740 ntBASIC19.77■□□□□ 0.76
LMNB1P20700 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.77■□□□□ 0.76
LMNB1P20700 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMNB1P20700 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LMNB1P20700 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
LMNB1P20700 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.76■□□□□ 0.75
LMNB1P20700 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.76■□□□□ 0.75
LMNB1P20700 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LMNB1P20700 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 AC006033.1-201ENST00000440505 426 ntBASIC19.76■□□□□ 0.75
LMNB1P20700 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.76■□□□□ 0.75
LMNB1P20700 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.76■□□□□ 0.75
LMNB1P20700 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.76■□□□□ 0.75
LMNB1P20700 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LMNB1P20700 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.76■□□□□ 0.75
LMNB1P20700 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.76■□□□□ 0.75
LMNB1P20700 AL391069.4-201ENST00000609583 481 ntBASIC19.76■□□□□ 0.75
LMNB1P20700 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LMNB1P20700 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.76■□□□□ 0.75
LMNB1P20700 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.76■□□□□ 0.75
LMNB1P20700 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMNB1P20700 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.76■□□□□ 0.75
LMNB1P20700 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
LMNB1P20700 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.75■□□□□ 0.75
LMNB1P20700 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.75■□□□□ 0.75
LMNB1P20700 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.75■□□□□ 0.75
LMNB1P20700 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LMNB1P20700 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 FO393414.2-201ENST00000405153 598 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 SLC25A24P2-201ENST00000415059 510 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 RPL13AP20-201ENST00000459725 609 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.75■□□□□ 0.75
LMNB1P20700 AP001889.1-201ENST00000525414 633 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.75■□□□□ 0.75
LMNB1P20700 PTP4A1P2-201ENST00000546033 454 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.75■□□□□ 0.75
LMNB1P20700 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.75■□□□□ 0.75
LMNB1P20700 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.75■□□□□ 0.75
LMNB1P20700 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LMNB1P20700 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 TUBB8P12-201ENST00000308911 1335 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 TUBB7P-202ENST00000428444 1305 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 TUBB8P7-204ENST00000567960 1332 ntBASIC19.75■□□□□ 0.75
LMNB1P20700 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMNB1P20700 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms