Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.12■□□□□ 0.49
GAP43P17677 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 AC079328.2-201ENST00000561241 3354 ntBASIC18.12■□□□□ 0.49
GAP43P17677 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 AL596087.1-201ENST00000400979 1969 ntBASIC18.12■□□□□ 0.49
GAP43P17677 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.12■□□□□ 0.49
GAP43P17677 GPX1P2-201ENST00000429271 606 ntBASIC18.12■□□□□ 0.49
GAP43P17677 CEND1P1-201ENST00000451006 455 ntBASIC18.12■□□□□ 0.49
GAP43P17677 KRT8P48-201ENST00000515599 1220 ntBASIC18.12■□□□□ 0.49
GAP43P17677 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.12■□□□□ 0.49
GAP43P17677 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.12■□□□□ 0.49
GAP43P17677 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.12■□□□□ 0.49
GAP43P17677 AC027307.2-201ENST00000591252 911 ntBASIC18.12■□□□□ 0.49
GAP43P17677 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.12■□□□□ 0.49
GAP43P17677 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.12■□□□□ 0.49
GAP43P17677 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.12■□□□□ 0.49
GAP43P17677 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GAP43P17677 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 AL589702.1-201ENST00000641229 1509 ntBASIC18.12■□□□□ 0.49
GAP43P17677 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAP43P17677 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.12■□□□□ 0.49
GAP43P17677 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 RPSAP43-201ENST00000402237 625 ntBASIC18.11■□□□□ 0.49
GAP43P17677 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
GAP43P17677 UPF3AP3-201ENST00000420996 769 ntBASIC18.11■□□□□ 0.49
GAP43P17677 TIMM8BP1-201ENST00000452384 211 ntBASIC18.11■□□□□ 0.49
GAP43P17677 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.11■□□□□ 0.49
GAP43P17677 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 AC079140.1-201ENST00000508039 487 ntBASIC18.11■□□□□ 0.49
GAP43P17677 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.11■□□□□ 0.49
GAP43P17677 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.11■□□□□ 0.49
GAP43P17677 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.11■□□□□ 0.49
GAP43P17677 KRT8P23-201ENST00000560090 1207 ntBASIC18.11■□□□□ 0.49
GAP43P17677 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 AL365330.1-201ENST00000607459 531 ntBASIC18.11■□□□□ 0.49
GAP43P17677 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
GAP43P17677 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.11■□□□□ 0.49
GAP43P17677 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAP43P17677 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GAP43P17677 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.1■□□□□ 0.49
GAP43P17677 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.1■□□□□ 0.49
GAP43P17677 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 AL513523.2-202ENST00000427283 2040 ntBASIC18.1■□□□□ 0.49
GAP43P17677 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.1■□□□□ 0.49
GAP43P17677 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.1■□□□□ 0.49
GAP43P17677 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GAP43P17677 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
GAP43P17677 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAP43P17677 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms