Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL11A1P12107 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.41■□□□□ 0.54
COL11A1P12107 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL11A1P12107 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL11A1P12107 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.4■□□□□ 0.54
COL11A1P12107 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
COL11A1P12107 AL691432.1-201ENST00000596308 1422 ntBASIC18.4■□□□□ 0.54
COL11A1P12107 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 KRT18P64-201ENST00000434946 1219 ntBASIC18.4■□□□□ 0.54
COL11A1P12107 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.4■□□□□ 0.54
COL11A1P12107 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.4■□□□□ 0.54
COL11A1P12107 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.4■□□□□ 0.54
COL11A1P12107 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.4■□□□□ 0.54
COL11A1P12107 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.4■□□□□ 0.54
COL11A1P12107 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.4■□□□□ 0.54
COL11A1P12107 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.4■□□□□ 0.54
COL11A1P12107 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL11A1P12107 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.4■□□□□ 0.54
COL11A1P12107 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.4■□□□□ 0.54
COL11A1P12107 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL11A1P12107 ANKRD19P-201ENST00000338192 862 ntBASIC18.39■□□□□ 0.54
COL11A1P12107 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.39■□□□□ 0.54
COL11A1P12107 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
COL11A1P12107 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.39■□□□□ 0.54
COL11A1P12107 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.39■□□□□ 0.54
COL11A1P12107 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.39■□□□□ 0.54
COL11A1P12107 RARRES2P5-201ENST00000564013 466 ntBASIC18.39■□□□□ 0.54
COL11A1P12107 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.39■□□□□ 0.54
COL11A1P12107 BRI3BPP1-201ENST00000594224 787 ntBASIC18.39■□□□□ 0.54
COL11A1P12107 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.39■□□□□ 0.54
COL11A1P12107 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL11A1P12107 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL11A1P12107 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL11A1P12107 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL11A1P12107 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.39■□□□□ 0.53
COL11A1P12107 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.39■□□□□ 0.53
COL11A1P12107 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.39■□□□□ 0.53
COL11A1P12107 KRT17P8-201ENST00000540749 863 ntBASIC18.39■□□□□ 0.53
COL11A1P12107 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.39■□□□□ 0.53
COL11A1P12107 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.39■□□□□ 0.53
COL11A1P12107 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL11A1P12107 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 AL359881.2-201ENST00000602973 570 ntBASIC18.39■□□□□ 0.53
COL11A1P12107 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL11A1P12107 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COL11A1P12107 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 ALOX12P2-203ENST00000570921 1945 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 AC012313.1-201ENST00000593393 3059 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.38■□□□□ 0.53
COL11A1P12107 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 FO393414.2-201ENST00000405153 598 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.38■□□□□ 0.53
COL11A1P12107 HNRNPUP1-201ENST00000554987 333 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 AC106886.1-201ENST00000568660 600 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
COL11A1P12107 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.38■□□□□ 0.53
COL11A1P12107 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.38■□□□□ 0.53
COL11A1P12107 TMEM261P1-201ENST00000604899 340 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms