Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 Y_RNA.110-201ENST00000363220 99 ntBASIC19.16■□□□□ 0.66
MYCNP04198 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 NPM1P31-201ENST00000399021 764 ntBASIC19.16■□□□□ 0.66
MYCNP04198 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 RNU2-72P-201ENST00000411175 163 ntBASIC19.16■□□□□ 0.66
MYCNP04198 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 AL009172.1-201ENST00000436365 1098 ntBASIC19.16■□□□□ 0.66
MYCNP04198 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.16■□□□□ 0.66
MYCNP04198 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC19.16■□□□□ 0.66
MYCNP04198 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.16■□□□□ 0.66
MYCNP04198 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.16■□□□□ 0.66
MYCNP04198 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 AC051619.7-201ENST00000568314 623 ntBASIC19.16■□□□□ 0.66
MYCNP04198 GTF2IP6-201ENST00000583143 541 ntBASIC19.16■□□□□ 0.66
MYCNP04198 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 AL645728.2-201ENST00000641974 660 ntBASIC19.16■□□□□ 0.66
MYCNP04198 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 AL513185.3-201ENST00000433335 1300 ntBASIC19.16■□□□□ 0.66
MYCNP04198 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MYCNP04198 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MYCNP04198 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
MYCNP04198 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
MYCNP04198 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
MYCNP04198 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.15■□□□□ 0.66
MYCNP04198 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.15■□□□□ 0.66
MYCNP04198 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.15■□□□□ 0.66
MYCNP04198 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 RNU6-925P-201ENST00000384629 104 ntBASIC19.15■□□□□ 0.66
MYCNP04198 SEPT7P2-202ENST00000398921 823 ntBASIC19.15■□□□□ 0.66
MYCNP04198 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC19.15■□□□□ 0.66
MYCNP04198 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.15■□□□□ 0.66
MYCNP04198 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC19.15■□□□□ 0.66
MYCNP04198 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 AC119751.4-201ENST00000507498 357 ntBASIC19.15■□□□□ 0.66
MYCNP04198 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.15■□□□□ 0.66
MYCNP04198 SLC25A39P2-201ENST00000537614 270 ntBASIC19.15■□□□□ 0.66
MYCNP04198 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
MYCNP04198 RARRES2P8-201ENST00000566335 367 ntBASIC19.15■□□□□ 0.66
MYCNP04198 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.15■□□□□ 0.66
MYCNP04198 AC106733.1-201ENST00000624476 1038 ntBASIC19.15■□□□□ 0.66
MYCNP04198 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
MYCNP04198 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.15■□□□□ 0.66
MYCNP04198 OR5AQ1P-202ENST00000641257 1534 ntBASIC19.15■□□□□ 0.66
MYCNP04198 OR5AQ1P-203ENST00000641818 1529 ntBASIC19.15■□□□□ 0.66
MYCNP04198 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MYCNP04198 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
MYCNP04198 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MYCNP04198 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.14■□□□□ 0.66
MYCNP04198 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MYCNP04198 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.14■□□□□ 0.66
MYCNP04198 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MYCNP04198 C8orf49-201ENST00000525043 1968 ntBASIC19.14■□□□□ 0.65
MYCNP04198 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MYCNP04198 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms