Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IFNA1P01562 MIR193BHG-211ENST00000641433 5365 ntBASIC13.08□□□□□ -0.31
IFNA1P01562 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IFNA1P01562 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
IFNA1P01562 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
IFNA1P01562 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
IFNA1P01562 DMBT1P1-203ENST00000636837 4628 ntBASIC13.08□□□□□ -0.31
IFNA1P01562 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
IFNA1P01562 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 AP000523.1-201ENST00000398242 1049 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 AC007663.1-201ENST00000438948 1240 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 POU5F1P6-201ENST00000466990 990 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 C1QBPP2-201ENST00000528754 825 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 AL512604.3-201ENST00000569583 964 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.08□□□□□ -0.32
IFNA1P01562 NEK4P2-201ENST00000580004 1012 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 AC005332.3-201ENST00000589904 676 ntBASIC13.08□□□□□ -0.32
IFNA1P01562 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.08□□□□□ -0.32
IFNA1P01562 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
IFNA1P01562 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IFNA1P01562 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 AC005089.1-201ENST00000619486 2241 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.07□□□□□ -0.32
IFNA1P01562 MIR648-201ENST00000385046 94 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 AC103564.2-201ENST00000432853 1299 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 STK19B-204ENST00000512515 211 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
IFNA1P01562 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.07□□□□□ -0.32
IFNA1P01562 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 AC013467.2-201ENST00000605472 835 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms