Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 AC023310.1-201ENST00000554836 735 ntBASIC18.53■□□□□ 0.56
ALDH1A1P00352 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 AC124283.3-201ENST00000570869 594 ntBASIC18.53■□□□□ 0.56
ALDH1A1P00352 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 INTS4P2-202ENST00000614726 2019 ntBASIC18.53■□□□□ 0.56
ALDH1A1P00352 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ALDH1A1P00352 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.53■□□□□ 0.56
ALDH1A1P00352 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AL354751.1-201ENST00000412768 1863 ntBASIC18.52■□□□□ 0.56
ALDH1A1P00352 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AC026954.1-201ENST00000429771 1293 ntBASIC18.52■□□□□ 0.56
ALDH1A1P00352 RPL13P2-201ENST00000440687 659 ntBASIC18.52■□□□□ 0.56
ALDH1A1P00352 AC012441.1-201ENST00000446669 685 ntBASIC18.52■□□□□ 0.56
ALDH1A1P00352 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AP002490.2-201ENST00000524791 560 ntBASIC18.52■□□□□ 0.56
ALDH1A1P00352 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 AC244452.3-201ENST00000636814 210 ntBASIC18.52■□□□□ 0.56
ALDH1A1P00352 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALDH1A1P00352 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.52■□□□□ 0.56
ALDH1A1P00352 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ALDH1A1P00352 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ALDH1A1P00352 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ALDH1A1P00352 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.52■□□□□ 0.55
ALDH1A1P00352 AL136982.4-201ENST00000437689 1740 ntBASIC18.52■□□□□ 0.55
ALDH1A1P00352 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 AC134312.5-201ENST00000568031 1313 ntBASIC18.51■□□□□ 0.55
ALDH1A1P00352 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 GPAA1P2-202ENST00000606848 1787 ntBASIC18.51■□□□□ 0.55
ALDH1A1P00352 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms