Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
GFRA3O60609 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.79■□□□□ 0.12
GFRA3O60609 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA3O60609 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
GFRA3O60609 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GFRA3O60609 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GFRA3O60609 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.78■□□□□ 0.12
GFRA3O60609 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
GFRA3O60609 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.78■□□□□ 0.12
GFRA3O60609 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GFRA3O60609 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GFRA3O60609 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 SPTLC1P5-201ENST00000450718 252 ntBASIC15.78■□□□□ 0.12
GFRA3O60609 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GFRA3O60609 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.78■□□□□ 0.12
GFRA3O60609 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GFRA3O60609 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 AC138649.2-201ENST00000615886 705 ntBASIC15.78■□□□□ 0.12
GFRA3O60609 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
GFRA3O60609 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GFRA3O60609 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.78■□□□□ 0.12
GFRA3O60609 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.78■□□□□ 0.12
GFRA3O60609 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 AC120498.9-201ENST00000339021 3867 ntBASIC15.78■□□□□ 0.12
GFRA3O60609 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.78■□□□□ 0.12
GFRA3O60609 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFRA3O60609 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.77■□□□□ 0.12
GFRA3O60609 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
GFRA3O60609 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.77■□□□□ 0.12
GFRA3O60609 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.77■□□□□ 0.12
GFRA3O60609 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.77■□□□□ 0.12
GFRA3O60609 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 AC006001.1-201ENST00000325130 474 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 FO393414.2-201ENST00000405153 598 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.77■□□□□ 0.12
GFRA3O60609 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GFRA3O60609 RN7SL11P-201ENST00000471305 293 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.77■□□□□ 0.12
GFRA3O60609 AC126915.1-201ENST00000522847 1038 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.77■□□□□ 0.12
GFRA3O60609 AC120045.2-201ENST00000567334 178 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.77■□□□□ 0.12
GFRA3O60609 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.77■□□□□ 0.12
GFRA3O60609 AL133499.1-201ENST00000596207 608 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 LINC01115-203ENST00000606068 577 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
GFRA3O60609 AC138951.2-201ENST00000623455 1161 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 LINC01451-201ENST00000623792 534 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 AC011491.1-203ENST00000637688 543 ntBASIC15.77■□□□□ 0.12
GFRA3O60609 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 AC018735.1-201ENST00000437208 1502 ntBASIC15.77■□□□□ 0.11
GFRA3O60609 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.77■□□□□ 0.11
GFRA3O60609 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.77■□□□□ 0.11
GFRA3O60609 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.77■□□□□ 0.11
GFRA3O60609 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GFRA3O60609 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GFRA3O60609 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
GFRA3O60609 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms