Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL139288.1-201ENST00000623748 933 ntBASIC16.15■□□□□ 0.18
PEX1O43933 FAM215A-202ENST00000632077 792 ntBASIC16.15■□□□□ 0.18
PEX1O43933 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PEX1O43933 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PEX1O43933 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PEX1O43933 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PEX1O43933 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PEX1O43933 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
PEX1O43933 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PEX1O43933 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PEX1O43933 AL603832.2-201ENST00000566195 2125 ntBASIC16.15■□□□□ 0.18
PEX1O43933 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
PEX1O43933 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PEX1O43933 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PEX1O43933 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.14■□□□□ 0.17
PEX1O43933 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PEX1O43933 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.14■□□□□ 0.17
PEX1O43933 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 AC002558.1-201ENST00000488906 803 ntBASIC16.14■□□□□ 0.17
PEX1O43933 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.14■□□□□ 0.17
PEX1O43933 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.14■□□□□ 0.17
PEX1O43933 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PEX1O43933 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.14■□□□□ 0.17
PEX1O43933 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.13■□□□□ 0.17
PEX1O43933 AC139887.3-201ENST00000568585 713 ntBASIC16.13■□□□□ 0.17
PEX1O43933 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 AL049840.3-201ENST00000602669 611 ntBASIC16.13■□□□□ 0.17
PEX1O43933 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.13■□□□□ 0.17
PEX1O43933 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.13■□□□□ 0.17
PEX1O43933 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.13■□□□□ 0.17
PEX1O43933 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
PEX1O43933 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PEX1O43933 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms