Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
KCNQ3O43525 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KCNQ3O43525 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.93■□□□□ 0.94
KCNQ3O43525 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
KCNQ3O43525 DGCR5-201ENST00000399539 862 ntBASIC20.93■□□□□ 0.94
KCNQ3O43525 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
KCNQ3O43525 WASH4P-201ENST00000564273 1246 ntBASIC20.93■□□□□ 0.94
KCNQ3O43525 MIR4321-201ENST00000592276 80 ntBASIC20.93■□□□□ 0.94
KCNQ3O43525 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.93■□□□□ 0.94
KCNQ3O43525 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.93■□□□□ 0.94
KCNQ3O43525 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
KCNQ3O43525 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
KCNQ3O43525 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
KCNQ3O43525 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
KCNQ3O43525 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNQ3O43525 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.92■□□□□ 0.94
KCNQ3O43525 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KCNQ3O43525 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
KCNQ3O43525 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNQ3O43525 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.92■□□□□ 0.94
KCNQ3O43525 AL139010.1-201ENST00000454878 894 ntBASIC20.92■□□□□ 0.94
KCNQ3O43525 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 DOC2GP-202ENST00000514950 1163 ntBASIC20.92■□□□□ 0.94
KCNQ3O43525 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNQ3O43525 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KCNQ3O43525 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 BTBD7P1-201ENST00000447253 1453 ntBASIC20.92■□□□□ 0.94
KCNQ3O43525 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNQ3O43525 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNQ3O43525 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNQ3O43525 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNQ3O43525 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KCNQ3O43525 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KCNQ3O43525 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.91■□□□□ 0.94
KCNQ3O43525 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KCNQ3O43525 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNQ3O43525 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNQ3O43525 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNQ3O43525 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNQ3O43525 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KCNQ3O43525 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNQ3O43525 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.91■□□□□ 0.94
KCNQ3O43525 CYP4F24P-201ENST00000586049 1580 ntBASIC20.91■□□□□ 0.94
KCNQ3O43525 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNQ3O43525 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNQ3O43525 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
KCNQ3O43525 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNQ3O43525 SRD5A3P1-201ENST00000603021 949 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms