Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 AC022188.1-201ENST00000620960 1664 ntBASIC17.58■□□□□ 0.4
O00370 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
O00370 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
O00370 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
O00370 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
O00370 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
O00370 PCGF3-213ENST00000620529 1899 ntBASIC17.57■□□□□ 0.4
O00370 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
O00370 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.57■□□□□ 0.4
O00370 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
O00370 AL355306.1-201ENST00000415580 579 ntBASIC17.57■□□□□ 0.4
O00370 HTR5BP-201ENST00000430851 1154 ntBASIC17.57■□□□□ 0.4
O00370 MKNK2P1-201ENST00000437526 628 ntBASIC17.57■□□□□ 0.4
O00370 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.57■□□□□ 0.4
O00370 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.57■□□□□ 0.4
O00370 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.57■□□□□ 0.4
O00370 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.57■□□□□ 0.4
O00370 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.57■□□□□ 0.4
O00370 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.57■□□□□ 0.4
O00370 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.57■□□□□ 0.4
O00370 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 AC020765.3-201ENST00000613051 740 ntBASIC17.57■□□□□ 0.4
O00370 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
O00370 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
O00370 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.57■□□□□ 0.4
O00370 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
O00370 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
O00370 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.57■□□□□ 0.4
O00370 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.57■□□□□ 0.4
O00370 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 ME2P1-201ENST00000426028 1970 ntBASIC17.57■□□□□ 0.4
O00370 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
O00370 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
O00370 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
O00370 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 WASH6P-202ENST00000359512 1437 ntBASIC17.56■□□□□ 0.4
O00370 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
O00370 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.56■□□□□ 0.4
O00370 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 GPX1P2-201ENST00000429271 606 ntBASIC17.56■□□□□ 0.4
O00370 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
O00370 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.56■□□□□ 0.4
O00370 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
O00370 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.56■□□□□ 0.4
O00370 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
O00370 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
O00370 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
O00370 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
O00370 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 CYP2T1P-202ENST00000641596 2535 ntBASIC17.56■□□□□ 0.4
O00370 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
O00370 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.56■□□□□ 0.4
O00370 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
O00370 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
O00370 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
O00370 OR6D1P-203ENST00000641209 4860 ntBASIC17.55■□□□□ 0.4
O00370 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.55■□□□□ 0.4
O00370 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
O00370 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
O00370 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.55■□□□□ 0.4
O00370 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms