Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 NSUN5P1-202ENST00000421140 1535 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 NSUN5P2-203ENST00000457352 1529 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AP003680.1-201ENST00000598970 3660 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AC007326.2-201ENST00000624224 7579 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 AC114341.1-201ENST00000618070 349 ntBASIC14.12□□□□□ -0.15
TMEM235A6NFC5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 KRT18P1-202ENST00000452408 1331 ntBASIC14.12□□□□□ -0.15
TMEM235A6NFC5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM235A6NFC5 AC079776.2-201ENST00000641154 1609 ntBASIC14.12□□□□□ -0.15
TMEM235A6NFC5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 GPAA1P2-202ENST00000606848 1787 ntBASIC14.11□□□□□ -0.15
TMEM235A6NFC5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AC016734.2-201ENST00000624325 1377 ntBASIC14.11□□□□□ -0.15
TMEM235A6NFC5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 KRT17P6-201ENST00000453795 1220 ntBASIC14.11□□□□□ -0.15
TMEM235A6NFC5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 MIR4492-201ENST00000581627 80 ntBASIC14.11□□□□□ -0.15
TMEM235A6NFC5 MPDU1-223ENST00000582151 728 ntBASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AC010331.1-201ENST00000611423 582 ntBASIC14.11□□□□□ -0.15
TMEM235A6NFC5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM235A6NFC5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms