Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 TSPY16P-201ENST00000449843 468 ntBASIC19.13■□□□□ 0.65
SLF1Q9BQI6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 AP002490.2-201ENST00000524791 560 ntBASIC19.13■□□□□ 0.65
SLF1Q9BQI6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 AGGF1P2-201ENST00000426656 2106 ntBASIC19.13■□□□□ 0.65
SLF1Q9BQI6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 AC236430.1-201ENST00000402231 743 ntBASIC19.12■□□□□ 0.65
SLF1Q9BQI6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 AL512638.1-201ENST00000457493 794 ntBASIC19.12■□□□□ 0.65
SLF1Q9BQI6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 SPTSSB-204ENST00000617024 1292 ntBASIC19.12■□□□□ 0.65
SLF1Q9BQI6 AL139011.1-202ENST00000642063 584 ntBASIC19.12■□□□□ 0.65
SLF1Q9BQI6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.12■□□□□ 0.65
SLF1Q9BQI6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 MIR661-201ENST00000384842 89 ntBASIC19.11■□□□□ 0.65
SLF1Q9BQI6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC002472.2-201ENST00000442739 958 ntBASIC19.11■□□□□ 0.65
SLF1Q9BQI6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 RN7SL204P-201ENST00000582831 262 ntBASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC073592.8-201ENST00000624126 511 ntBASIC19.11■□□□□ 0.65
SLF1Q9BQI6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 AC060834.1-201ENST00000443027 2032 ntBASIC19.11■□□□□ 0.65
SLF1Q9BQI6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLF1Q9BQI6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms