Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 AP005018.1-201ENST00000525475 301 ntBASIC16.49■□□□□ 0.23
SIPA1Q96FS4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 AL662799.1-202ENST00000614205 422 ntBASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AL512652.2-201ENST00000625156 1716 ntBASIC16.48■□□□□ 0.23
SIPA1Q96FS4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AL645728.1-201ENST00000366221 2101 ntBASIC16.48■□□□□ 0.23
SIPA1Q96FS4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 GAPDHP21-201ENST00000450301 1010 ntBASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AC009477.1-201ENST00000452936 217 ntBASIC16.48■□□□□ 0.23
SIPA1Q96FS4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 BANF1P1-201ENST00000553684 263 ntBASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIPA1Q96FS4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 SPTLC1P1-201ENST00000447199 261 ntBASIC16.47■□□□□ 0.23
SIPA1Q96FS4 AC093724.1-201ENST00000448659 1027 ntBASIC16.47■□□□□ 0.23
SIPA1Q96FS4 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.47■□□□□ 0.23
SIPA1Q96FS4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 AL079307.3-201ENST00000556114 283 ntBASIC16.47■□□□□ 0.23
SIPA1Q96FS4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 SPDYE22P-201ENST00000582158 798 ntBASIC16.47■□□□□ 0.23
SIPA1Q96FS4 AC024267.1-201ENST00000582320 895 ntBASIC16.47■□□□□ 0.23
SIPA1Q96FS4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms