Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 SLC25A47P1-201ENST00000531577 414 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 MIR4538-201ENST00000581377 78 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 AC233724.13-201ENST00000598383 410 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 LINC01115-203ENST00000606068 577 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 PCGF3-213ENST00000620529 1899 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 KRT43P-201ENST00000434019 910 ntBASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 AL583810.1-201ENST00000553344 1045 ntBASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 AC093525.8-201ENST00000624099 1342 ntBASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KLHDC9Q8NEP7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 AL442647.2-201ENST00000429864 857 ntBASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 ACTBP11-201ENST00000436287 1126 ntBASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHDC9Q8NEP7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHDC9Q8NEP7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms