Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM35BQ8NCS4 AC006449.6-201ENST00000612330 2296 ntBASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 MIR574-201ENST00000385209 96 ntBASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 AC112191.1-201ENST00000523689 701 ntBASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM35BQ8NCS4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 AC016027.1-202ENST00000607927 1699 ntBASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 AC040169.1-201ENST00000565382 521 ntBASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM35BQ8NCS4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM35BQ8NCS4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.46■□□□□ 0.38
TMEM35BQ8NCS4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TMEM35BQ8NCS4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 AL513523.2-202ENST00000427283 2040 ntBASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 AC023274.1-201ENST00000418278 595 ntBASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM35BQ8NCS4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms