Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HIST3H2BA-201ENST00000436555 524 ntBASIC10□□□□□ -0.81
VPS13BQ7Z7G8 KRT8P13-201ENST00000463294 1010 ntBASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 GOLGA2P4-201ENST00000441462 777 ntBASIC10□□□□□ -0.81
VPS13BQ7Z7G8 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 RNA5SP410-201ENST00000516285 106 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AL162726.2-201ENST00000438986 1017 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 RPL13AP20-201ENST00000459725 609 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 SERBP1P3-201ENST00000459980 809 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AC009053.2-201ENST00000563701 2365 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms