Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AC092171.3-201ENST00000610122 2651 ntBASIC20.67■□□□□ 0.9
COPS6Q7L5N1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 AP005018.1-201ENST00000525475 301 ntBASIC20.67■□□□□ 0.9
COPS6Q7L5N1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS6Q7L5N1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 PIN1P1-201ENST00000412108 996 ntBASIC20.66■□□□□ 0.9
COPS6Q7L5N1 SPDYE17-201ENST00000412399 783 ntBASIC20.66■□□□□ 0.9
COPS6Q7L5N1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 AC010336.2-201ENST00000564226 506 ntBASIC20.66■□□□□ 0.9
COPS6Q7L5N1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 AC239800.4-201ENST00000603712 296 ntBASIC20.66■□□□□ 0.9
COPS6Q7L5N1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS6Q7L5N1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 KRT8P12-202ENST00000472924 1397 ntBASIC20.65■□□□□ 0.9
COPS6Q7L5N1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 SPDYE22P-201ENST00000582158 798 ntBASIC20.65■□□□□ 0.9
COPS6Q7L5N1 AC004233.3-201ENST00000607794 1269 ntBASIC20.65■□□□□ 0.9
COPS6Q7L5N1 AL662799.1-202ENST00000614205 422 ntBASIC20.65■□□□□ 0.9
COPS6Q7L5N1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS6Q7L5N1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
COPS6Q7L5N1 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.64■□□□□ 0.9
COPS6Q7L5N1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPS6Q7L5N1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.64■□□□□ 0.89
COPS6Q7L5N1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPS6Q7L5N1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPS6Q7L5N1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.64■□□□□ 0.89
COPS6Q7L5N1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms